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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G163100.1 Wheat cytosol 95.89 92.94
TraesCS6B01G186100.1 Wheat cytosol 95.57 91.79
TraesCS6A01G165100.1 Wheat cytosol 95.57 91.79
TraesCS6D01G148600.1 Wheat cytosol 94.62 90.88
HORVU6Hr1G032290.1 Barley cytosol 74.68 88.39
TraesCS6A01G093000.1 Wheat cytosol 76.27 73.03
Os03t0307200-01 Rice endoplasmic reticulum 75.0 72.7
TraesCS6A01G386200.1 Wheat cytosol 74.37 71.21
TraesCS5A01G552400.1 Wheat cytosol 73.73 69.97
Zm00001d047658_P001 Maize cytosol 71.84 69.42
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 71.84 69.42
TraesCS2A01G049900.1 Wheat cytosol 72.47 69.39
TraesCS5A01G552000.1 Wheat cytosol 72.47 68.77
Zm00001d047656_P001 Maize cytosol 70.57 68.2
TraesCS2A01G033500.1 Wheat cytosol 58.86 66.43
TraesCS2A01G095700.1 Wheat cytosol 61.08 56.76
TraesCS6A01G398700.1 Wheat cytosol, plastid 49.37 47.56
GSMUA_Achr2P00420_001 Banana cytosol 43.99 43.99
GSMUA_Achr5P21100_001 Banana cytosol 43.67 43.81
TraesCS3A01G468300.1 Wheat plastid 44.94 41.76
KRG96720 Soybean cytosol 39.24 39.37
KXG39528 Sorghum cytosol 74.68 39.07
PGSC0003DMT400007275 Potato cytosol 38.92 38.8
Solyc01g100490.2.1 Tomato cytosol 38.61 38.49
KRH36982 Soybean cytosol 37.34 38.19
AT4G26483.1 Thale cress cytosol, extracellular, plastid 10.13 38.1
VIT_14s0060g01190.t01 Wine grape cytosol 38.92 38.08
KRH68436 Soybean cytosol 38.61 38.01
Bra038164.1-P Field mustard cytosol 38.29 37.46
CDX94325 Canola cytosol 32.91 37.41
AT1G09240.1 Thale cress cytosol 37.66 37.19
Bra018573.1-P Field mustard cytosol 37.97 37.15
CDX94991 Canola cytosol 37.97 37.15
CDY42364 Canola cytosol 37.66 36.96
CDY39002 Canola cytosol 37.66 36.96
CDX93517 Canola cytosol 37.66 36.84
Zm00001d028887_P001 Maize cytosol 69.94 36.77
Zm00001d028888_P001 Maize cytosol, extracellular 69.94 36.77
AT1G56430.1 Thale cress cytosol 37.66 36.73
CDX98807 Canola cytosol 34.49 36.7
CDY69948 Canola cytosol 32.28 36.69
AT5G04950.1 Thale cress cytosol 37.03 36.56
CDY06526 Canola cytosol 36.71 36.25
CDY64985 Canola cytosol 36.71 36.25
Bra035602.1-P Field mustard cytosol 36.71 36.25
Bra005831.1-P Field mustard cytosol 36.39 35.94
CDY17383 Canola cytosol 36.39 35.94
CDY28616 Canola cytosol 36.39 35.94
AT5G56080.1 Thale cress cytosol 36.39 35.94
Bra002851.1-P Field mustard cytosol 36.08 35.62
CDY46596 Canola cytosol 23.42 35.58
VIT_11s0052g01150.t01 Wine grape plastid 31.96 35.56
CDY11321 Canola cytosol 35.76 35.31
Bra009407.1-P Field mustard cytosol 34.18 35.18
CDX80931 Canola cytosol 35.44 35.0
KRH43850 Soybean cytosol 31.65 34.97
CDX70180 Canola cytosol 35.76 34.77
KRH13614 Soybean cytosol 31.01 34.27
Bra004521.1-P Field mustard cytosol 16.46 28.11
Zm00001d047639_P004 Maize extracellular 72.15 23.05
CDY01124 Canola cytosol 9.18 23.02
GSMUA_Achr11P... Banana cytosol 42.09 22.5
CDY09316 Canola cytosol 6.65 20.39
Protein Annotations
EnsemblPlants:TraesCS6A01G163200.1EnsemblPlantsGene:TraesCS6A01G163200Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410GO:GO:0030418
InterPro:IPR004298InterPro:Nicotian_synthInterPro:SAM-dependent_MTasesncoils:CoilPANTHER:PTHR32266PANTHER:PTHR32266:SF10
PFAM:PF03059PFscan:PS51142SUPFAM:SSF53335MapMan:25.4.3.1.1::
Description
No Description!
Coordinates
chr6A:-:158448453..158455016
Molecular Weight (calculated)
33701.3 Da
IEP (calculated)
4.958
GRAVY (calculated)
0.112
Length
316 amino acids
Sequence
(BLAST)
001: MDAQNMEVAA LIEKIAGLQA AIAELPSLSP SPEVDRLFTD LVTACVPPSP VDVTKLSPEH QGMREALIRL CSAAEGKLEA HYADLLATFD NPLDHLARFP
101: YYSNYVNLSR LEYELLARHV PGIAPARVAF VGSGPLPFSS FVLAAHHLPD AHFDNYDLCG AANERARKLF GASEDGDVAD LTQELGAYDV VFLAALIGMA
201: AEEKAKVIAH LGAHMVEGAS LVVRSAHGAC GFLYPIVDPE DIRRGGFEVL AVHHPEGEVI NSVIVARKAV DAQLSGPQNG ARGAVPLVSP PCSFSTKMEA
301: SALKKSEELA TKELAF
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.