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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018573.1-P Field mustard cytosol 98.76 98.76
CDX93517 Canola cytosol 95.67 95.67
AT1G09240.1 Thale cress cytosol 82.35 83.12
CDY42364 Canola cytosol 73.06 73.29
CDY39002 Canola cytosol 72.76 72.98
CDY06526 Canola cytosol 63.78 64.38
CDY64985 Canola cytosol 63.78 64.38
CDX98807 Canola cytosol 58.51 63.64
CDY17383 Canola cytosol 62.23 62.81
CDY28616 Canola cytosol 61.92 62.5
CDX80931 Canola cytosol 61.3 61.88
VIT_14s0060g01190.t01 Wine grape cytosol 61.3 61.3
CDY11321 Canola cytosol 60.68 61.25
CDX70180 Canola cytosol 61.3 60.92
KRG96720 Soybean cytosol 59.13 60.63
Solyc01g100490.2.1 Tomato cytosol 59.13 60.25
PGSC0003DMT400007275 Potato cytosol 58.82 59.94
KRH68436 Soybean cytosol 59.13 59.5
CDX94325 Canola cytosol 51.08 59.35
CDY69948 Canola cytosol 49.54 57.55
KRH36982 Soybean cytosol 52.94 55.34
GSMUA_Achr5P21100_001 Banana cytosol 50.77 52.06
GSMUA_Achr2P00420_001 Banana cytosol 50.46 51.58
CDY09316 Canola cytosol 15.79 49.51
CDY46596 Canola cytosol 30.65 47.6
CDY01124 Canola cytosol 18.27 46.83
HORVU6Hr1G032290.1 Barley cytosol 36.84 44.57
Zm00001d012829_P001 Maize cytosol 15.48 43.48
TraesCS3B01G068400.1 Wheat cytosol 24.15 43.33
HORVU4Hr1G089750.2 Barley cytosol 26.93 43.28
TraesCS2A01G033500.1 Wheat cytosol 36.53 42.14
TraesCS6A01G386200.1 Wheat cytosol 43.03 42.12
TraesCS6D01G370800.1 Wheat cytosol 43.03 42.12
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 42.41 41.9
Zm00001d047658_P001 Maize cytosol 42.41 41.9
TraesCS6A01G093000.1 Wheat cytosol 42.72 41.82
HORVU4Hr1G053790.1 Barley cytosol 42.72 41.82
TraesCS2B01G060800.1 Wheat cytosol 42.72 41.82
TraesCS3B01G068500.1 Wheat cytosol 23.22 41.67
TraesCS2D01G049200.1 Wheat cytosol 42.41 41.52
Zm00001d047656_P001 Maize cytosol 41.8 41.28
TraesCS6B01G425200.1 Wheat cytosol, peroxisome, plastid 42.11 41.21
TraesCS4B01G183900.1 Wheat cytosol 42.11 41.21
TraesCS2A01G049900.1 Wheat cytosol 42.11 41.21
TraesCSU01G125200.1 Wheat cytosol 42.11 40.84
TraesCSU01G125500.1 Wheat cytosol 42.11 40.84
TraesCS5A01G552000.1 Wheat cytosol 41.8 40.54
Os03t0307200-01 Rice endoplasmic reticulum 40.87 40.49
TraesCS2D01G033000.1 Wheat peroxisome 37.15 40.4
TraesCS5A01G552400.1 Wheat cytosol 41.49 40.24
Os07t0689600-01 Rice cytosol 42.11 39.65
TraesCS2B01G047100.2 Wheat cytosol 38.08 39.55
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 42.72 39.32
TraesCS6D01G382900.1 Wheat cytosol, plastid 39.63 39.02
TraesCS6A01G163100.1 Wheat cytosol 39.32 38.96
TraesCS6A01G165100.1 Wheat cytosol 39.63 38.91
HORVU2Hr1G015980.1 Barley cytosol 40.87 38.82
TraesCS2B01G111100.1 Wheat cytosol 40.87 38.82
HORVU4Hr1G053770.1 Barley cytosol 39.63 38.79
TraesCS6D01G148200.1 Wheat cytosol 39.32 38.6
TraesCS6D01G148000.1 Wheat cytosol 39.32 38.6
TraesCS2A01G095700.1 Wheat cytosol 40.56 38.53
TraesCS2D01G094200.1 Wheat cytosol 40.56 38.53
TraesCS6D01G148600.1 Wheat cytosol 39.01 38.3
TraesCS6B01G186100.1 Wheat cytosol 39.01 38.3
TraesCS6B01G187400.1 Wheat cytosol 39.01 38.3
HORVU6Hr1G090040.1 Barley cytosol 42.41 38.16
TraesCS6A01G163200.1 Wheat cytosol 37.15 37.97
TraesCS6B01G438900.1 Wheat cytosol, plastid 38.39 37.8
TraesCS6A01G398700.1 Wheat cytosol, plastid 38.08 37.5
TraesCS4D01G184900.1 Wheat plastid 42.41 35.68
Zm00001d022557_P001 Maize cytosol 39.63 35.26
Zm00001d013655_P001 Maize cytosol 38.7 35.11
Zm00001d033496_P001 Maize cytosol 39.01 35.1
TraesCS3A01G468300.1 Wheat plastid 36.53 34.71
EER93732 Sorghum cytosol 38.7 34.44
HORVU0Hr1G017720.1 Barley cytosol, plastid 27.86 33.71
HORVU2Hr1G004960.1 Barley mitochondrion 36.53 29.43
HORVU3Hr1G010650.1 Barley plastid 21.36 27.06
GSMUA_Achr11P... Banana cytosol 48.92 26.73
HORVU4Hr1G089870.1 Barley cytosol 17.34 26.67
TraesCS3D01G055800.1 Wheat cytosol 15.79 23.72
HORVU6Hr1G090180.2 Barley nucleus 42.11 22.3
Zm00001d028887_P001 Maize cytosol 40.56 21.8
KXG39528 Sorghum cytosol 40.56 21.69
Zm00001d028888_P001 Maize cytosol, extracellular 40.25 21.63
TraesCSU01G125100.1 Wheat cytosol, plasma membrane, vacuole 6.5 20.19
Zm00001d047639_P004 Maize extracellular 42.11 13.75
Protein Annotations
MapMan:25.4.3.1.1Gene3D:3.40.50.150GO:A0A078E0M8EnsemblPlants:CDX94991ProteinID:CDX94991ProteinID:CDX94991.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016740GO:GO:0030410GO:GO:0030418EnsemblPlantsGene:GSBRNA2T00100490001InterPro:IPR004298InterPro:Nicotian_synth
PFAM:PF03059PFscan:PS51142PANTHER:PTHR32266PANTHER:PTHR32266:SF12MetaCyc:PWY-5912MetaCyc:PWY-5957
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0004EBDED4SEG:seg::
Description
BnaC05g06800D
Coordinates
chrLK031886:-:568830..570041
Molecular Weight (calculated)
36088.8 Da
IEP (calculated)
5.703
GRAVY (calculated)
0.011
Length
323 amino acids
Sequence
(BLAST)
001: MDCQEEQLVN TICDLYEKIS KLESLKPSED VNILFSQLVS TCIPPNPNID VTKMCDTVQE TRQKLIKICG EAEGHLEHHF SSILTSFEDN PLHHLNIFPY
101: YNNYIKLGKL EYDLLTQNLN GLVPRNVAFI GSGPLPLTSI VLASSHLKET VFHNFDIDSS ANSLASLLVS SDPDISQRMF FHTVDIMNVT ESLKSFDVVF
201: LAALVGMNKE DKVRVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKLLVVSN GSVVGGPSCL LMPCNCSKIH
301: AIMNKKKKMM IEELEASREE QFS
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.