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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
MultiLoc:cytosol
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G053790.1 Barley cytosol 89.09 89.09
TraesCS4B01G183900.1 Wheat cytosol 86.36 86.36
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 88.79 83.48
HORVU4Hr1G089750.2 Barley cytosol 48.18 79.1
HORVU6Hr1G090040.1 Barley cytosol 84.24 77.44
TraesCS4D01G184900.1 Wheat plastid 86.67 74.48
HORVU6Hr1G032290.1 Barley cytosol 56.36 69.66
Zm00001d047658_P001 Maize cytosol 68.48 69.11
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 68.48 69.11
Zm00001d047656_P001 Maize cytosol 67.27 67.89
Os03t0307200-01 Rice endoplasmic reticulum 66.06 66.87
HORVU4Hr1G089870.1 Barley cytosol 37.88 59.52
HORVU2Hr1G015980.1 Barley cytosol 59.09 57.35
HORVU6Hr1G090180.2 Barley nucleus 83.94 45.41
GSMUA_Achr5P21100_001 Banana cytosol 42.73 44.76
HORVU2Hr1G004960.1 Barley mitochondrion 54.24 44.64
GSMUA_Achr2P00420_001 Banana cytosol 42.73 44.62
HORVU0Hr1G017720.1 Barley cytosol, plastid 33.33 41.2
HORVU3Hr1G010650.1 Barley plastid 31.52 40.78
Bra018573.1-P Field mustard cytosol 39.09 39.94
Solyc01g100490.2.1 Tomato cytosol 38.18 39.75
AT1G09240.1 Thale cress cytosol 38.48 39.69
CDX94991 Canola cytosol 38.79 39.63
CDX93517 Canola cytosol 38.79 39.63
PGSC0003DMT400007275 Potato cytosol 37.88 39.43
CDX98807 Canola cytosol 35.45 39.39
AT5G04950.1 Thale cress cytosol 37.88 39.06
CDY06526 Canola cytosol 37.88 39.06
Bra038164.1-P Field mustard cytosol 38.18 39.01
AT1G56430.1 Thale cress cytosol 38.18 38.89
CDY42364 Canola cytosol 37.88 38.82
CDY64985 Canola cytosol 37.58 38.75
Bra035602.1-P Field mustard cytosol 37.58 38.75
CDY39002 Canola cytosol 37.58 38.51
CDX94325 Canola cytosol 32.42 38.49
AT5G56080.1 Thale cress cytosol 37.27 38.44
CDY28616 Canola cytosol 36.97 38.12
CDY17383 Canola cytosol 36.97 38.12
Bra005831.1-P Field mustard cytosol 36.97 38.12
Bra002851.1-P Field mustard cytosol 36.97 38.12
CDY11321 Canola cytosol 36.97 38.12
AT4G26483.1 Thale cress cytosol, extracellular, plastid 9.7 38.1
CDX80931 Canola cytosol 36.67 37.81
KXG39528 Sorghum cytosol 69.09 37.75
KRG96720 Soybean cytosol 35.76 37.46
Bra009407.1-P Field mustard cytosol 34.85 37.46
CDY69948 Canola cytosol 31.52 37.41
KRH68436 Soybean cytosol 36.36 37.38
VIT_14s0060g01190.t01 Wine grape cytosol 36.36 37.15
Zm00001d028887_P001 Maize cytosol 66.67 36.61
KRH36982 Soybean cytosol 33.94 36.25
Zm00001d028888_P001 Maize cytosol, extracellular 65.76 36.11
CDX70180 Canola cytosol 35.45 36.0
CDY46596 Canola cytosol 21.82 34.62
KRH43850 Soybean cytosol 27.88 32.17
VIT_11s0052g01150.t01 Wine grape plastid 27.58 32.04
KRH13614 Soybean cytosol 27.27 31.47
Bra004521.1-P Field mustard cytosol 15.76 28.11
CDY01124 Canola cytosol 9.7 25.4
GSMUA_Achr11P... Banana cytosol 41.21 23.01
Zm00001d047639_P004 Maize extracellular 68.18 22.75
CDY09316 Canola cytosol 6.67 21.36
Protein Annotations
EnsemblPlants:HORVU4Hr1G053770.1EnsemblPlantsGene:HORVU4Hr1G053770Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410GO:GO:0030418
InterPro:IPR004298InterPro:Nicotian_synthPANTHER:PTHR32266PANTHER:PTHR32266:SF10PFAM:PF03059PFscan:PS51142
UniParc:UPI000B470247UniProt:A0A287P374MapMan:25.4.3.1.1:::
Description
No Description!
Coordinates
chrchr4H:+:448121552..448122561
Molecular Weight (calculated)
35604.5 Da
IEP (calculated)
5.515
GRAVY (calculated)
0.010
Length
330 amino acids
Sequence
(BLAST)
001: MDAQNKEVDA LVQKITSLHT AIAKLSSLSP SPDVDALFTD LVTACIPPSS MDVTKLGPEV QEMREGIIRL CSEAEGKLEA HYSDMLAAFD NPLDHLGMFP
101: YYSNYINLSK LECELQARYV PGGIAPARVA FIGSGPLSFS SYVLAARRLP DAMFDNYDLC GAANDRASKL FRTDKDVGAR MSFHTADVAD LTGELTAYYI
201: VFLGALVGMA ADDKAKVITH LGAHMTDGAA LVVRSAHGAC GFLYPIVDPH DIGRGGFEVL VVYHPDDDVV NSVIIAHKSK DVHANECHNG RGGRCARGAV
301: PVVSPPCRFD EMVADVTHKR EEFANAKVAF
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.