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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G053790.1 Barley cytosol 94.85 94.85
TraesCS2B01G060800.1 Wheat cytosol 92.73 92.73
TraesCS6B01G425200.1 Wheat cytosol, peroxisome, plastid 92.12 92.12
TraesCS3B01G068500.1 Wheat cytosol 48.79 89.44
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 94.55 88.89
TraesCS3B01G068400.1 Wheat cytosol 48.18 88.33
HORVU4Hr1G053770.1 Barley cytosol 86.36 86.36
TraesCS4D01G184900.1 Wheat plastid 97.88 84.11
TraesCS6B01G186100.1 Wheat cytosol 74.85 75.08
TraesCS6B01G187400.1 Wheat cytosol 74.55 74.77
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 72.73 73.39
Zm00001d047658_P001 Maize cytosol 72.73 73.39
Os03t0307200-01 Rice endoplasmic reticulum 71.82 72.7
Zm00001d047656_P001 Maize cytosol 70.91 71.56
TraesCS2B01G047100.2 Wheat cytosol 63.33 67.2
TraesCS2B01G111100.1 Wheat cytosol 61.21 59.41
TraesCS6B01G438900.1 Wheat cytosol, plastid 48.18 48.48
GSMUA_Achr5P21100_001 Banana cytosol 44.24 46.35
GSMUA_Achr2P00420_001 Banana cytosol 44.24 46.2
Bra018573.1-P Field mustard cytosol 41.52 42.41
Solyc01g100490.2.1 Tomato cytosol 40.61 42.27
CDX94991 Canola cytosol 41.21 42.11
PGSC0003DMT400007275 Potato cytosol 40.3 41.96
AT1G09240.1 Thale cress cytosol 40.61 41.88
CDX93517 Canola cytosol 40.91 41.8
Bra035602.1-P Field mustard cytosol 40.3 41.56
CDY64985 Canola cytosol 40.3 41.56
CDX98807 Canola cytosol 37.27 41.41
CDY06526 Canola cytosol 40.0 41.25
AT5G04950.1 Thale cress cytosol 39.7 40.94
AT5G56080.1 Thale cress cytosol 39.7 40.94
CDX94325 Canola cytosol 34.24 40.65
KXG39528 Sorghum cytosol 73.94 40.4
Bra002851.1-P Field mustard cytosol 39.09 40.31
Bra038164.1-P Field mustard cytosol 39.39 40.25
AT1G56430.1 Thale cress cytosol 39.39 40.12
CDY39002 Canola cytosol 39.09 40.06
CDY28616 Canola cytosol 38.79 40.0
CDY11321 Canola cytosol 38.79 40.0
Bra005831.1-P Field mustard cytosol 38.79 40.0
CDY17383 Canola cytosol 38.79 40.0
CDY42364 Canola cytosol 38.79 39.75
Bra009407.1-P Field mustard cytosol 36.97 39.74
CDX80931 Canola cytosol 38.48 39.69
KRG96720 Soybean cytosol 37.88 39.68
VIT_14s0060g01190.t01 Wine grape cytosol 38.48 39.32
KRH68436 Soybean cytosol 38.18 39.25
CDY69948 Canola cytosol 33.03 39.21
Zm00001d028887_P001 Maize cytosol 71.21 39.1
Zm00001d028888_P001 Maize cytosol, extracellular 70.3 38.6
KRH36982 Soybean cytosol 35.76 38.19
CDX70180 Canola cytosol 37.58 38.15
VIT_11s0052g01150.t01 Wine grape plastid 30.91 35.92
AT4G26483.1 Thale cress cytosol, extracellular, plastid 9.09 35.71
CDY46596 Canola cytosol 22.42 35.58
KRH43850 Soybean cytosol 30.61 35.31
KRH13614 Soybean cytosol 30.0 34.62
Bra004521.1-P Field mustard cytosol 16.97 30.27
CDY01124 Canola cytosol 10.0 26.19
Zm00001d047639_P004 Maize extracellular 73.03 24.37
GSMUA_Achr11P... Banana cytosol 42.42 23.69
CDY09316 Canola cytosol 6.97 22.33
Protein Annotations
EnsemblPlants:TraesCS4B01G183900.1EnsemblPlantsGene:TraesCS4B01G183900Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410GO:GO:0030418
InterPro:IPR004298InterPro:Nicotian_synthInterPro:SAM-dependent_MTasesPANTHER:PTHR32266PANTHER:PTHR32266:SF10PFAM:PF03059
PFscan:PS51142SUPFAM:SSF53335MapMan:25.4.3.1.1:::
Description
No Description!
Coordinates
chr4B:-:403253337..403254329
Molecular Weight (calculated)
35457.3 Da
IEP (calculated)
5.345
GRAVY (calculated)
0.008
Length
330 amino acids
Sequence
(BLAST)
001: MDAQNKEVDA LVHKITGLHA AIAKLPSLSP SPDVDALFTD LVTACVPPSP VDVTKLGPEA QEMREGLIRL CSEAEGKLEA HYSDMLAAFD NPLHHLAIFP
101: YYSNYINLSK LEYELLARYV PGGIAPARVA FIGSGPLPFS SYVLAARHLP DTMFDNYDLC GAANDRASKL FRADKEVGAR MSFHTADVAD LAGELAAYDV
201: VFLAALVGMA AEDKAKVIAH LGAHMADGSA LVVRSAHGAR GFLYPIVDPQ DIGRGGFEVL AVCHPDDDVV NSVIIAQKSK DMHANEHRNG RGGQYARGTV
301: PVVSPPCRFG EMVADVTQKR EEFANAEVAF
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.