Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G187400.1 | Wheat | cytosol | 98.18 | 98.18 |
| TraesCS6D01G148600.1 | Wheat | cytosol | 97.26 | 97.26 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 91.79 | 95.57 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 76.6 | 94.38 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 75.68 | 76.38 |
| TraesCS4B01G183900.1 | Wheat | cytosol | 75.08 | 74.85 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 74.77 | 74.55 |
| TraesCS2B01G060800.1 | Wheat | cytosol | 73.56 | 73.33 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 71.43 | 71.87 |
| Zm00001d047658_P001 | Maize | cytosol | 71.43 | 71.87 |
| Zm00001d047656_P001 | Maize | cytosol | 70.21 | 70.64 |
| TraesCS3B01G068500.1 | Wheat | cytosol | 38.3 | 70.0 |
| TraesCS3B01G068400.1 | Wheat | cytosol | 37.99 | 69.44 |
| TraesCS2B01G047100.2 | Wheat | cytosol | 61.7 | 65.27 |
| TraesCS2B01G111100.1 | Wheat | cytosol | 60.79 | 58.82 |
| TraesCS6B01G438900.1 | Wheat | cytosol, plastid | 49.54 | 49.7 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 45.29 | 47.15 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 44.38 | 46.35 |
| PGSC0003DMT400007275 | Potato | cytosol | 39.82 | 41.32 |
| KRG96720 | Soybean | cytosol | 39.51 | 41.27 |
| Solyc01g100490.2.1 | Tomato | cytosol | 39.51 | 41.01 |
| KXG39528 | Sorghum | cytosol | 74.77 | 40.73 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 39.51 | 40.25 |
| KRH36982 | Soybean | cytosol | 37.69 | 40.13 |
| KRH68436 | Soybean | cytosol | 38.91 | 39.88 |
| Bra038164.1-P | Field mustard | cytosol | 38.91 | 39.63 |
| CDX94325 | Canola | cytosol | 33.43 | 39.57 |
| AT1G09240.1 | Thale cress | cytosol | 38.3 | 39.38 |
| CDY39002 | Canola | cytosol | 38.3 | 39.13 |
| CDY42364 | Canola | cytosol | 38.3 | 39.13 |
| Bra018573.1-P | Field mustard | cytosol | 38.3 | 39.01 |
| CDX94991 | Canola | cytosol | 38.3 | 39.01 |
| AT1G56430.1 | Thale cress | cytosol | 38.3 | 38.89 |
| CDY69948 | Canola | cytosol | 32.83 | 38.85 |
| AT5G04950.1 | Thale cress | cytosol | 37.69 | 38.75 |
| CDX98807 | Canola | cytosol | 34.95 | 38.72 |
| CDX93517 | Canola | cytosol | 37.99 | 38.7 |
| CDY64985 | Canola | cytosol | 37.39 | 38.44 |
| Bra035602.1-P | Field mustard | cytosol | 37.39 | 38.44 |
| Zm00001d028887_P001 | Maize | cytosol | 70.21 | 38.44 |
| CDY06526 | Canola | cytosol | 37.08 | 38.12 |
| AT5G56080.1 | Thale cress | cytosol | 37.08 | 38.12 |
| Bra005831.1-P | Field mustard | cytosol | 37.08 | 38.12 |
| CDY17383 | Canola | cytosol | 37.08 | 38.12 |
| CDY28616 | Canola | cytosol | 37.08 | 38.12 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 69.6 | 38.1 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 9.73 | 38.1 |
| Bra002851.1-P | Field mustard | cytosol | 36.78 | 37.81 |
| CDY11321 | Canola | cytosol | 36.47 | 37.5 |
| CDY46596 | Canola | cytosol | 23.71 | 37.5 |
| Bra009407.1-P | Field mustard | cytosol | 34.95 | 37.46 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 32.22 | 37.32 |
| CDX80931 | Canola | cytosol | 36.17 | 37.19 |
| KRH43850 | Soybean | cytosol | 32.22 | 37.06 |
| CDX70180 | Canola | cytosol | 36.17 | 36.62 |
| KRH13614 | Soybean | cytosol | 31.61 | 36.36 |
| Bra004521.1-P | Field mustard | cytosol | 15.81 | 28.11 |
| GSMUA_Achr11P... | Banana | cytosol | 43.47 | 24.2 |
| Zm00001d047639_P004 | Maize | extracellular | 72.34 | 24.06 |
| CDY01124 | Canola | cytosol | 8.81 | 23.02 |
| CDY09316 | Canola | cytosol | 6.38 | 20.39 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G186100.1 | EnsemblPlantsGene:TraesCS6B01G186100 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | InterPro:SAM-dependent_MTases | ncoils:Coil | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 |
| PFAM:PF03059 | PFscan:PS51142 | SUPFAM:SSF53335 | MapMan:25.4.3.1.1 | : | : |
Description
No Description!
Coordinates
chr6B:-:212158696..212159685
Molecular Weight (calculated)
35273.1 Da
IEP (calculated)
5.696
GRAVY (calculated)
0.016
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAQNKEVAA LIEKIAGLQS AIAELPSLSP SPEVDRLFTD LVTACVPPSP VDVAKLSPEH QRMREALIRL CSAAEGKLEA HYADLLATFD NPLDHLARFP
101: YYSNYVNLSR LEYELLARHV PGIAPARVAF VGSGPLPFSS FVLAAHHLPD AHFDNYDLCG AANERARKLF GASEDGVGAR MKFHTADVAD LTQELGAYDV
201: VFLAALVGMA AEEKAKVIAH LGAHMLEGAS LVVRSAHGAR GFLYPIVDPE DIRRGGFEVL AVHHPEGEVI NSVIVARKAV DAQLSGPQNG DAHARGAVPL
301: VSPPCSFSTK MEAGALEKSE ERATKELAF
101: YYSNYVNLSR LEYELLARHV PGIAPARVAF VGSGPLPFSS FVLAAHHLPD AHFDNYDLCG AANERARKLF GASEDGVGAR MKFHTADVAD LTQELGAYDV
201: VFLAALVGMA AEEKAKVIAH LGAHMLEGAS LVVRSAHGAR GFLYPIVDPE DIRRGGFEVL AVHHPEGEVI NSVIVARKAV DAQLSGPQNG DAHARGAVPL
301: VSPPCSFSTK MEAGALEKSE ERATKELAF
1: MDPGALLMLR SARGLRSFLY VDVDPCDLKG FEVLEIYHPS MSDGFVNSVM VARKLTDRLI KYEWSRLEPY LWNKADDDFP NEAL
Arabidopsis Description
Nicotianamine synthase [Source:UniProtKB/TrEMBL;Acc:F4JUZ6]
SUBAcon: [plastid,extracellular,cytosol]
SUBAcon: [plastid,extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.