Factsheet for VIT_14s0060g01190.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68436	Soybean	cytosol	70.59	71.03
KRG96720	Soybean	cytosol	69.04	70.79
PGSC0003DMT400007275	Potato	cytosol	65.33	66.56
Solyc01g100490.2.1	Tomato	cytosol	64.4	65.62
AT1G09240.1	Thale cress	cytosol	61.61	62.19
Bra018573.1-P	Field mustard	cytosol	61.61	61.61
CDX94991	Canola	cytosol	61.3	61.3
CDX93517	Canola	cytosol	61.3	61.3
Bra038164.1-P	Field mustard	cytosol	61.3	61.3
CDY42364	Canola	cytosol	60.68	60.87
AT1G56430.1	Thale cress	cytosol	60.99	60.8
CDY39002	Canola	cytosol	60.37	60.56
CDX98807	Canola	cytosol	55.42	60.27
CDX94325	Canola	cytosol	51.39	59.71
CDY69948	Canola	cytosol	50.77	58.99
Bra009407.1-P	Field mustard	cytosol	55.11	57.98
Bra005831.1-P	Field mustard	cytosol	57.28	57.81
CDX80931	Canola	cytosol	56.97	57.5
AT5G04950.1	Thale cress	cytosol	56.66	57.19
CDY11321	Canola	cytosol	56.35	56.88
CDY28616	Canola	cytosol	56.35	56.88
CDY06526	Canola	cytosol	56.04	56.56
Bra002851.1-P	Field mustard	cytosol	55.73	56.25
CDY17383	Canola	cytosol	55.73	56.25
CDX70180	Canola	cytosol	56.04	55.69
Bra035602.1-P	Field mustard	cytosol	55.11	55.62
CDY64985	Canola	cytosol	55.11	55.62
AT5G56080.1	Thale cress	cytosol	55.11	55.62
GSMUA_Achr2P00420_001	Banana	cytosol	53.87	55.06
GSMUA_Achr5P21100_001	Banana	cytosol	53.25	54.6
VIT_11s0052g01150.t01	Wine grape	plastid	44.27	50.35
CDY46596	Canola	cytosol	32.2	50.0
Bra004521.1-P	Field mustard	cytosol	27.86	48.65
Zm00001d012829_P001	Maize	cytosol	16.72	46.96
HORVU6Hr1G032290.1	Barley	cytosol	37.77	45.69
AT4G26483.1	Thale cress	cytosol, extracellular, plastid	11.76	45.24
CDY09316	Canola	cytosol	14.24	44.66
CDY01124	Canola	cytosol	17.03	43.65
TraesCS2A01G033500.1	Wheat	cytosol	37.46	43.21
HORVU4Hr1G089750.2	Barley	cytosol	26.63	42.79
TraesCS2D01G033000.1	Wheat	peroxisome	39.01	42.42
TraesCS3B01G068500.1	Wheat	cytosol	23.53	42.22
TraesCS3B01G068400.1	Wheat	cytosol	23.22	41.67
Zm00001d047651_P001	Maize	cytosol, endoplasmic reticulum, extracellular	42.11	41.59
Zm00001d047658_P001	Maize	cytosol	42.11	41.59
Zm00001d047656_P001	Maize	cytosol	41.18	40.67
Os03t0307200-01	Rice	endoplasmic reticulum	40.87	40.49
Os07t0689600-01	Rice	cytosol	42.41	39.94
TraesCS6D01G382900.1	Wheat	cytosol, plastid	40.56	39.94
TraesCS6B01G438900.1	Wheat	cytosol, plastid	40.56	39.94
TraesCS6A01G163100.1	Wheat	cytosol	40.25	39.88
TraesCS6D01G370800.1	Wheat	cytosol	40.56	39.7
TraesCS6B01G425200.1	Wheat	cytosol, peroxisome, plastid	40.56	39.7
TraesCS6A01G386200.1	Wheat	cytosol	40.56	39.7
TraesCS6A01G093000.1	Wheat	cytosol	40.56	39.7
TraesCSU01G125500.1	Wheat	cytosol	40.87	39.64
TraesCSU01G125200.1	Wheat	cytosol	40.87	39.64
TraesCS6A01G398700.1	Wheat	cytosol, plastid	40.25	39.63
TraesCS2B01G047100.2	Wheat	cytosol	38.08	39.55
TraesCS6D01G148000.1	Wheat	cytosol	40.25	39.51
TraesCS6B01G186100.1	Wheat	cytosol	40.25	39.51
TraesCS6A01G165100.1	Wheat	cytosol	40.25	39.51
HORVU2Hr1G015980.1	Barley	cytosol	41.49	39.41
TraesCS5A01G552000.1	Wheat	cytosol	40.56	39.34
TraesCS6D01G148200.1	Wheat	cytosol	39.94	39.21
TraesCS6B01G187400.1	Wheat	cytosol	39.94	39.21
TraesCS2B01G111100.1	Wheat	cytosol	41.18	39.12
TraesCS2D01G049200.1	Wheat	cytosol	39.94	39.09
HORVU4Hr1G053790.1	Barley	cytosol	39.94	39.09
TraesCS5A01G552400.1	Wheat	cytosol	40.25	39.04
TraesCS6A01G163200.1	Wheat	cytosol	38.08	38.92
TraesCS6D01G148600.1	Wheat	cytosol	39.63	38.91
TraesCS2D01G094200.1	Wheat	cytosol	40.87	38.82
TraesCS2A01G095700.1	Wheat	cytosol	40.87	38.82
TraesCS2B01G060800.1	Wheat	cytosol	39.63	38.79
TraesCS4B01G183900.1	Wheat	cytosol	39.32	38.48
TraesCS2A01G049900.1	Wheat	cytosol	39.32	38.48
HORVU0Hr1G017720.1	Barley	cytosol, plastid	30.96	37.45
Zm00001d033496_P001	Maize	cytosol	41.49	37.33
TraesCS3A01G468300.1	Wheat	plastid	38.7	36.76
HORVU4Hr1G053850.2	Barley	cytosol, plasma membrane	39.94	36.75
HORVU4Hr1G053770.1	Barley	cytosol	37.15	36.36
Zm00001d013655_P001	Maize	cytosol	39.94	36.24
HORVU6Hr1G090040.1	Barley	cytosol	40.25	36.21
Zm00001d022557_P001	Maize	cytosol	40.56	36.09
EER93732	Sorghum	cytosol	39.63	35.26
TraesCS4D01G184900.1	Wheat	plastid	40.25	33.85
HORVU2Hr1G004960.1	Barley	mitochondrion	37.46	30.17
GSMUA_Achr11P...	Banana	cytosol	53.56	29.27
HORVU3Hr1G010650.1	Barley	plastid	20.74	26.27
TraesCS3D01G055800.1	Wheat	cytosol	17.03	25.58
HORVU4Hr1G089870.1	Barley	cytosol	15.79	24.29
Zm00001d028887_P001	Maize	cytosol	41.49	22.3
Zm00001d028888_P001	Maize	cytosol, extracellular	41.49	22.3
KXG39528	Sorghum	cytosol	39.94	21.36
TraesCSU01G125100.1	Wheat	cytosol, plasma membrane, vacuole	6.81	21.15
HORVU6Hr1G090180.2	Barley	nucleus	39.94	21.15
Zm00001d047639_P004	Maize	extracellular	41.8	13.65

Protein Annotations

EntrezGene:100254544	wikigene:100254544	MapMan:25.4.3.1.1	Gene3D:3.40.50.150	EMBL:AM442803	ProteinID:CAN65138
ProteinID:CAN65138.1	ProteinID:CCB61914	ProteinID:CCB61914.1	UniProt:F6I4S7	EMBL:FN596746	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0030410	GO:GO:0030418	InterPro:IPR004298	EntrezGene:LOC100254544	wikigene:LOC100254544	InterPro:Nicotian_synth
PFAM:PF03059	PFscan:PS51142	PANTHER:PTHR32266	PANTHER:PTHR32266:SF12	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
TIGR:TC60730	UniParc:UPI00021099AA	ArrayExpress:VIT_14s0060g01190	EnsemblPlantsGene:VIT_14s0060g01190	EnsemblPlants:VIT_14s0060g01190.t01	unigene:Vvi.8913
RefSeq:XP_002282175	RefSeq:XP_002282175.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:-:941773..942959

Molecular Weight (calculated)

36334.2 Da

IEP (calculated)

5.847

GRAVY (calculated)

0.075

Length

323 amino acids

Sequence
(BLAST)

001: MGCQDELLVE KVCEMYEKIS RLESLKPSKD VNMLFTQLVR TCMPPSPIDV TKLCKRVQEM RSKLIRLCGE AEGLLEGHFS TILGSYENPL DHLNLFPYYS
101: NYLKLSLLEF TLLSQNCTHV PSKIAFVGSG PLPLTSIVLA SYHLTTTSFH NYDIDPAANS MAAHLVSSDP DFSKRMLFHT TDIMNVTNEL KEYDVVYLAA
201: LVGMDKEEKI QVMDHLAKHM APGALLMLRS AHGARAFLYP VIDPCDLRGF EVLSIFHPTD EVINSVVVAR KFPMHVHSLD QGLGPMILPS KCSEIQVFNP
301: LEELTIEDSS VLQIFFSSFS LYH

Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)

001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS

Arabidopsis Description

NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.