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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
TargetP:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G033500.1 Wheat cytosol 64.34 92.14
TraesCS2D01G033000.1 Wheat peroxisome 65.34 88.22
TraesCS2B01G047100.2 Wheat cytosol 64.84 83.6
HORVU4Hr1G053790.1 Barley cytosol 49.88 60.61
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 50.12 57.27
HORVU6Hr1G032290.1 Barley cytosol 37.66 56.55
HORVU6Hr1G090040.1 Barley cytosol 49.63 55.43
HORVU4Hr1G053770.1 Barley cytosol 44.64 54.24
HORVU4Hr1G089870.1 Barley cytosol 28.18 53.81
HORVU2Hr1G015980.1 Barley cytosol 44.14 52.06
HORVU4Hr1G089750.2 Barley cytosol 23.94 47.76
HORVU0Hr1G017720.1 Barley cytosol, plastid 28.93 43.45
GSMUA_Achr5P21100_001 Banana cytosol 32.92 41.9
GSMUA_Achr2P00420_001 Banana cytosol 31.92 40.51
CDX98807 Canola cytosol 29.93 40.4
Bra009407.1-P Field mustard cytosol 29.93 39.09
Solyc01g100490.2.1 Tomato cytosol 30.67 38.8
PGSC0003DMT400007275 Potato cytosol 30.67 38.8
CDX94325 Canola cytosol 26.68 38.49
VIT_11s0052g01150.t01 Wine grape plastid 27.18 38.38
KRH36982 Soybean cytosol 29.18 37.86
AT5G04950.1 Thale cress cytosol 30.17 37.81
KRG96720 Soybean cytosol 29.68 37.78
Bra005831.1-P Field mustard cytosol 29.93 37.5
AT5G56080.1 Thale cress cytosol 29.93 37.5
VIT_14s0060g01190.t01 Wine grape cytosol 30.17 37.46
CDY69948 Canola cytosol 25.94 37.41
CDY39002 Canola cytosol 29.93 37.27
CDY42364 Canola cytosol 29.93 37.27
CDY64985 Canola cytosol 29.68 37.19
Bra035602.1-P Field mustard cytosol 29.68 37.19
CDY06526 Canola cytosol 29.68 37.19
Bra038164.1-P Field mustard cytosol 29.93 37.15
CDY11321 Canola cytosol 29.43 36.88
CDX80931 Canola cytosol 29.43 36.88
AT1G09240.1 Thale cress cytosol 29.18 36.56
CDY28616 Canola cytosol 29.18 36.56
Bra018573.1-P Field mustard cytosol 29.43 36.53
CDX94991 Canola cytosol 29.43 36.53
KRH68436 Soybean cytosol 29.18 36.45
CDX70180 Canola cytosol 29.43 36.31
Bra002851.1-P Field mustard cytosol 28.93 36.25
CDY17383 Canola cytosol 28.93 36.25
CDX93517 Canola cytosol 29.18 36.22
AT1G56430.1 Thale cress cytosol 28.93 35.8
KRH43850 Soybean cytosol 25.44 35.66
KRH13614 Soybean cytosol 25.19 35.31
CDY46596 Canola cytosol 17.71 34.13
HORVU3Hr1G010650.1 Barley plastid 21.2 33.33
HORVU6Hr1G090180.2 Barley nucleus 50.62 33.28
AT4G26483.1 Thale cress cytosol, extracellular, plastid 6.23 29.76
Bra004521.1-P Field mustard cytosol 12.97 28.11
GSMUA_Achr11P... Banana cytosol 33.42 22.67
CDY01124 Canola cytosol 6.73 21.43
CDY09316 Canola cytosol 4.99 19.42
Protein Annotations
EnsemblPlants:HORVU2Hr1G004960.1EnsemblPlantsGene:HORVU2Hr1G004960Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410GO:GO:0030418
InterPro:IPR004298InterPro:Nicotian_synthInterPro:SAM-dependent_MTasesPANTHER:PTHR32266PANTHER:PTHR32266:SF10PFAM:PF03059
PFscan:PS51142SUPFAM:SSF53335UniParc:UPI000B47B14DUniProt:A0A287GYG1MapMan:25.4.3.1.1:
Description
No Description!
Coordinates
chrchr2H:+:11116194..11120048
Molecular Weight (calculated)
43118.5 Da
IEP (calculated)
7.812
GRAVY (calculated)
-0.129
Length
401 amino acids
Sequence
(BLAST)
001: RFHVHEAFRR ARFLSPVPIP FSSLRLYQSK KSPRSELRPP PAARGSSGRP PAPAATQPVA FSASGARERR RPPPHAGEKL VRPRTAEGGL AVELEQTPAG
101: RLPQKSTTTP AIPTWQSSDM EAENGEVAAL VEKITGLHAA ISKLPSLSPS PQVDALFTEL VAACVPSSPV DVTKLGPEAQ EMRQDLIRLC SAAEGLLEAH
201: YSDMLTALDS PLDHLGRFPY FDNYVNLSKL EHDLLAGHVA APARVAFIGS GPLPFSSLFL ATYHLRDTRF DNYDRCSVAN GRAMKLVGAA DEGVRSRMAF
301: HTAEVTNLTA ELGTYDVVFL AALVGMTSEE KADAIAHLGK HMADGAVLVA RSAHGARAFL YPVVELDDVG RGGFQVLAVH HPAGDEVFNS FIVARKVKMS
401: A
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.