Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69948 | Canola | cytosol | 94.96 | 94.96 |
| CDY09316 | Canola | cytosol | 31.65 | 85.44 |
| CDY01124 | Canola | cytosol | 34.89 | 76.98 |
| CDX98807 | Canola | cytosol | 67.27 | 62.96 |
| CDY06526 | Canola | cytosol | 70.14 | 60.94 |
| CDY11321 | Canola | cytosol | 69.06 | 60.0 |
| CDY28616 | Canola | cytosol | 69.06 | 60.0 |
| CDY64985 | Canola | cytosol | 68.35 | 59.38 |
| CDX80931 | Canola | cytosol | 67.99 | 59.06 |
| CDY17383 | Canola | cytosol | 67.63 | 58.75 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 17.27 | 57.14 |
| CDX70180 | Canola | cytosol | 66.55 | 56.92 |
| CDY46596 | Canola | cytosol | 40.65 | 54.33 |
| CDX93517 | Canola | cytosol | 60.07 | 51.7 |
| KRG96720 | Soybean | cytosol | 58.27 | 51.43 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 59.71 | 51.39 |
| CDY42364 | Canola | cytosol | 59.35 | 51.24 |
| KRH68436 | Soybean | cytosol | 58.99 | 51.09 |
| CDX94991 | Canola | cytosol | 59.35 | 51.08 |
| CDY39002 | Canola | cytosol | 58.99 | 50.93 |
| PGSC0003DMT400007275 | Potato | cytosol | 55.76 | 48.9 |
| Solyc01g100490.2.1 | Tomato | cytosol | 54.68 | 47.95 |
| KRH36982 | Soybean | cytosol | 52.16 | 46.93 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 52.52 | 46.2 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 49.64 | 43.81 |
| Zm00001d012829_P001 | Maize | cytosol | 16.19 | 39.13 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 37.41 | 38.95 |
| HORVU4Hr1G089750.2 | Barley | cytosol | 28.06 | 38.81 |
| TraesCS2A01G033500.1 | Wheat | cytosol | 38.49 | 38.21 |
| TraesCS2D01G033000.1 | Wheat | peroxisome | 38.85 | 36.36 |
| TraesCS3B01G068400.1 | Wheat | cytosol | 23.38 | 36.11 |
| TraesCS3B01G068500.1 | Wheat | cytosol | 23.38 | 36.11 |
| Zm00001d047658_P001 | Maize | cytosol | 42.45 | 36.09 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 42.45 | 36.09 |
| Zm00001d047656_P001 | Maize | cytosol | 41.37 | 35.17 |
| TraesCS6D01G382900.1 | Wheat | cytosol, plastid | 41.37 | 35.06 |
| TraesCS6D01G370800.1 | Wheat | cytosol | 41.37 | 34.85 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 41.37 | 34.85 |
| TraesCS2D01G049200.1 | Wheat | cytosol | 41.37 | 34.85 |
| TraesCS2B01G060800.1 | Wheat | cytosol | 41.37 | 34.85 |
| TraesCS5A01G552000.1 | Wheat | cytosol | 41.73 | 34.83 |
| TraesCS6B01G438900.1 | Wheat | cytosol, plastid | 41.01 | 34.76 |
| TraesCS2B01G047100.2 | Wheat | cytosol | 38.85 | 34.73 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 40.65 | 34.66 |
| HORVU4Hr1G053790.1 | Barley | cytosol | 41.01 | 34.55 |
| TraesCS6A01G386200.1 | Wheat | cytosol | 41.01 | 34.55 |
| TraesCS6A01G093000.1 | Wheat | cytosol | 41.01 | 34.55 |
| TraesCSU01G125500.1 | Wheat | cytosol | 41.37 | 34.53 |
| TraesCSU01G125200.1 | Wheat | cytosol | 41.37 | 34.53 |
| TraesCS4B01G183900.1 | Wheat | cytosol | 40.65 | 34.24 |
| TraesCS2A01G049900.1 | Wheat | cytosol | 40.65 | 34.24 |
| TraesCS6A01G163100.1 | Wheat | cytosol | 39.93 | 34.05 |
| TraesCS5A01G552400.1 | Wheat | cytosol | 40.65 | 33.93 |
| TraesCS6A01G398700.1 | Wheat | cytosol, plastid | 39.93 | 33.84 |
| TraesCS6D01G148000.1 | Wheat | cytosol | 39.57 | 33.43 |
| TraesCS6B01G187400.1 | Wheat | cytosol | 39.57 | 33.43 |
| TraesCS6B01G186100.1 | Wheat | cytosol | 39.57 | 33.43 |
| TraesCS6A01G165100.1 | Wheat | cytosol | 39.57 | 33.43 |
| TraesCS6D01G148200.1 | Wheat | cytosol | 39.21 | 33.13 |
| TraesCS2D01G094200.1 | Wheat | cytosol | 40.29 | 32.94 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 37.41 | 32.91 |
| TraesCS6D01G148600.1 | Wheat | cytosol | 38.85 | 32.83 |
| HORVU4Hr1G053850.2 | Barley | cytosol, plasma membrane | 41.01 | 32.48 |
| HORVU4Hr1G053770.1 | Barley | cytosol | 38.49 | 32.42 |
| Os07t0689600-01 | Rice | cytosol | 39.93 | 32.36 |
| TraesCS2B01G111100.1 | Wheat | cytosol | 39.57 | 32.35 |
| TraesCS2A01G095700.1 | Wheat | cytosol | 39.57 | 32.35 |
| HORVU2Hr1G015980.1 | Barley | cytosol | 38.85 | 31.76 |
| HORVU6Hr1G090040.1 | Barley | cytosol | 40.65 | 31.48 |
| Zm00001d013655_P001 | Maize | cytosol | 39.21 | 30.62 |
| Zm00001d033496_P001 | Maize | cytosol | 39.21 | 30.36 |
| HORVU0Hr1G017720.1 | Barley | cytosol, plastid | 29.14 | 30.34 |
| EER93732 | Sorghum | cytosol | 38.85 | 29.75 |
| TraesCS4D01G184900.1 | Wheat | plastid | 41.01 | 29.69 |
| TraesCS3A01G468300.1 | Wheat | plastid | 35.61 | 29.12 |
| Zm00001d022557_P001 | Maize | cytosol | 37.77 | 28.93 |
| HORVU2Hr1G004960.1 | Barley | mitochondrion | 38.49 | 26.68 |
| HORVU3Hr1G010650.1 | Barley | plastid | 22.66 | 24.71 |
| GSMUA_Achr11P... | Banana | cytosol | 51.44 | 24.2 |
| TraesCS3D01G055800.1 | Wheat | cytosol | 17.27 | 22.33 |
| HORVU4Hr1G089870.1 | Barley | cytosol | 16.55 | 21.9 |
| TraesCSU01G125100.1 | Wheat | cytosol, plasma membrane, vacuole | 7.19 | 19.23 |
| Zm00001d028887_P001 | Maize | cytosol | 41.37 | 19.13 |
| KXG39528 | Sorghum | cytosol | 40.65 | 18.71 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 40.29 | 18.64 |
| HORVU6Hr1G090180.2 | Barley | nucleus | 40.65 | 18.52 |
| Zm00001d047639_P004 | Maize | extracellular | 43.17 | 12.13 |
Protein Annotations
| MapMan:25.4.3.1.1 | Gene3D:3.40.50.150 | GO:A0A078DY98 | EnsemblPlants:CDX94325 | ProteinID:CDX94325 | ProteinID:CDX94325.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 | EnsemblPlantsGene:GSBRNA2T00157431001 | InterPro:IPR004298 | InterPro:Nicotian_synth |
| PFAM:PF03059 | PFscan:PS51142 | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF12 | MetaCyc:PWY-5912 | MetaCyc:PWY-5957 |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI0004EECDEE | : | : | : |
Description
BnaC01g18590D
Coordinates
chrLK031881:+:260282..261118
Molecular Weight (calculated)
31339.0 Da
IEP (calculated)
7.108
GRAVY (calculated)
-0.026
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MACQKAHFKN QILELYNKIS NLKSLKPSKN VDTLFQELMS TCLPTETNID VEKLCPKVQD IRTNLIKLRS EAIGYSEQHF STVLGSLEDN PLHHLDLYPY
101: YTNYLKLSKV EFDLLMLRTS HVPTKIAFVG SGSLPFTSII LAKFHLPNTT FHNFDIDPQA NSLASKLVSR DPDLSSRIIF HTVDILNATE ILRDYEVVFL
201: ASLVGVDKEA KVKVIEHLGK HMAPGALLML RSAKGLRAFL YIDVDPCDLR GFEVLETYHP SLSDGFVNSV MVARKLSD
101: YTNYLKLSKV EFDLLMLRTS HVPTKIAFVG SGSLPFTSII LAKFHLPNTT FHNFDIDPQA NSLASKLVSR DPDLSSRIIF HTVDILNATE ILRDYEVVFL
201: ASLVGVDKEA KVKVIEHLGK HMAPGALLML RSAKGLRAFL YIDVDPCDLR GFEVLETYHP SLSDGFVNSV MVARKLSD
1: MDPGALLMLR SARGLRSFLY VDVDPCDLKG FEVLEIYHPS MSDGFVNSVM VARKLTDRLI KYEWSRLEPY LWNKADDDFP NEAL
Arabidopsis Description
Nicotianamine synthase [Source:UniProtKB/TrEMBL;Acc:F4JUZ6]
SUBAcon: [plastid,extracellular,cytosol]
SUBAcon: [plastid,extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.