Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G068500.1 | Wheat | cytosol | 93.89 | 93.89 |
| HORVU4Hr1G089750.2 | Barley | cytosol | 88.89 | 79.6 |
| TraesCSU01G125500.1 | Wheat | cytosol | 91.11 | 49.25 |
| TraesCSU01G125200.1 | Wheat | cytosol | 91.11 | 49.25 |
| TraesCS4B01G183900.1 | Wheat | cytosol | 88.33 | 48.18 |
| TraesCS5A01G552400.1 | Wheat | cytosol | 87.22 | 47.15 |
| TraesCS2B01G060800.1 | Wheat | cytosol | 86.11 | 46.97 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 85.56 | 46.67 |
| TraesCS5A01G552000.1 | Wheat | cytosol | 85.56 | 46.25 |
| Zm00001d047658_P001 | Maize | cytosol | 70.0 | 38.53 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 70.0 | 38.53 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 17.78 | 38.1 |
| TraesCS6B01G186100.1 | Wheat | cytosol | 69.44 | 37.99 |
| TraesCS6B01G187400.1 | Wheat | cytosol | 68.89 | 37.69 |
| Zm00001d047656_P001 | Maize | cytosol | 67.78 | 37.31 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 64.44 | 35.58 |
| TraesCS2B01G047100.2 | Wheat | cytosol | 52.22 | 30.23 |
| TraesCS2B01G111100.1 | Wheat | cytosol | 56.67 | 30.0 |
| HORVU3Hr1G010650.1 | Barley | plastid | 42.22 | 29.8 |
| TraesCS6B01G438900.1 | Wheat | cytosol, plastid | 50.56 | 27.74 |
| Solyc01g100490.2.1 | Tomato | cytosol | 47.22 | 26.81 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 46.11 | 26.27 |
| PGSC0003DMT400007275 | Potato | cytosol | 45.56 | 25.87 |
| KRH36982 | Soybean | cytosol | 43.33 | 25.24 |
| AT1G09240.1 | Thale cress | cytosol | 44.44 | 25.0 |
| CDY64985 | Canola | cytosol | 43.89 | 24.69 |
| Bra035602.1-P | Field mustard | cytosol | 43.89 | 24.69 |
| CDY06526 | Canola | cytosol | 43.89 | 24.69 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 42.78 | 24.44 |
| AT5G56080.1 | Thale cress | cytosol | 43.33 | 24.38 |
| CDY28616 | Canola | cytosol | 43.33 | 24.38 |
| Bra002851.1-P | Field mustard | cytosol | 43.33 | 24.38 |
| CDY17383 | Canola | cytosol | 43.33 | 24.38 |
| CDX94991 | Canola | cytosol | 43.33 | 24.15 |
| CDX93517 | Canola | cytosol | 42.78 | 23.84 |
| Bra018573.1-P | Field mustard | cytosol | 42.78 | 23.84 |
| KRG96720 | Soybean | cytosol | 41.67 | 23.81 |
| KRH68436 | Soybean | cytosol | 42.22 | 23.68 |
| AT5G04950.1 | Thale cress | cytosol | 41.67 | 23.44 |
| CDY11321 | Canola | cytosol | 41.67 | 23.44 |
| CDX94325 | Canola | cytosol | 36.11 | 23.38 |
| CDX98807 | Canola | cytosol | 38.33 | 23.23 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 41.67 | 23.22 |
| Bra005831.1-P | Field mustard | cytosol | 41.11 | 23.12 |
| CDX80931 | Canola | cytosol | 40.56 | 22.81 |
| Bra009407.1-P | Field mustard | cytosol | 38.89 | 22.8 |
| CDY69948 | Canola | cytosol | 34.44 | 22.3 |
| Bra038164.1-P | Field mustard | cytosol | 40.0 | 22.29 |
| AT1G56430.1 | Thale cress | cytosol | 40.0 | 22.22 |
| CDX70180 | Canola | cytosol | 40.0 | 22.15 |
| CDY42364 | Canola | cytosol | 39.44 | 22.05 |
| CDY39002 | Canola | cytosol | 38.89 | 21.74 |
| CDY46596 | Canola | cytosol | 23.89 | 20.67 |
| KXG39528 | Sorghum | cytosol | 68.89 | 20.53 |
| KRH43850 | Soybean | cytosol | 32.22 | 20.28 |
| KRH13614 | Soybean | cytosol | 32.22 | 20.28 |
| Zm00001d028887_P001 | Maize | cytosol | 66.11 | 19.8 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 66.11 | 19.8 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 30.56 | 19.37 |
| GSMUA_Achr11P... | Banana | cytosol | 43.33 | 13.2 |
| Zm00001d047639_P004 | Maize | extracellular | 68.89 | 12.54 |
| Bra004521.1-P | Field mustard | cytosol | 6.11 | 5.95 |
| CDY01124 | Canola | cytosol | 0.0 | 0.0 |
| CDY09316 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G068400.1 | EnsemblPlantsGene:TraesCS3B01G068400 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | InterPro:SAM-dependent_MTases | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 | PFAM:PF03059 |
| PFscan:PS51142 | SUPFAM:SSF53335 | MapMan:25.4.3.1.1 | : | : | : |
Description
No Description!
Coordinates
chr3B:+:40535120..40535913
Molecular Weight (calculated)
19129.7 Da
IEP (calculated)
6.390
GRAVY (calculated)
-0.023
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDNYDQCSA ANERASKLFR ADTDVGARMS FHTADVADLA GELAKYDVVF LAALVGMAAE DKANVIAHLG AHMADGAALV VRSAHGARGF LYPIVDPQDI
101: GRGGFEVLAV CHPDDDVVNS VIIAQKTKDV HASGLRSGRA GDGQYARGTV PVVSPPCRFG KMVAHVNQKR EEFAKAEVAF
101: GRGGFEVLAV CHPDDDVVNS VIIAQKTKDV HASGLRSGRA GDGQYARGTV PVVSPPCRFG KMVAHVNQKR EEFAKAEVAF
1: MDPGALLMLR SARGLRSFLY VDVDPCDLKG FEVLEIYHPS MSDGFVNSVM VARKLTDRLI KYEWSRLEPY LWNKADDDFP NEAL
Arabidopsis Description
Nicotianamine synthase [Source:UniProtKB/TrEMBL;Acc:F4JUZ6]
SUBAcon: [plastid,extracellular,cytosol]
SUBAcon: [plastid,extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.