Factsheet for Zm00001d028887_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028888_P001	Maize	cytosol, extracellular	97.0	97.0
KXG39528	Sorghum	cytosol	92.35	91.89
Zm00001d047658_P001	Maize	cytosol	45.42	83.49
Zm00001d047651_P001	Maize	cytosol, endoplasmic reticulum, extracellular	45.42	83.49
Zm00001d047656_P001	Maize	cytosol	44.26	81.35
Os03t0307200-01	Rice	endoplasmic reticulum	40.43	74.54
TraesCS2D01G049200.1	Wheat	cytosol	40.1	73.03
TraesCS6A01G093000.1	Wheat	cytosol	40.1	73.03
TraesCSU01G125200.1	Wheat	cytosol	40.1	72.37
TraesCSU01G125500.1	Wheat	cytosol	40.1	72.37
TraesCS2B01G060800.1	Wheat	cytosol	39.6	72.12
TraesCS2A01G049900.1	Wheat	cytosol	39.6	72.12
HORVU4Hr1G053790.1	Barley	cytosol	39.6	72.12
TraesCS5A01G552000.1	Wheat	cytosol	39.77	71.77
TraesCS5A01G552400.1	Wheat	cytosol	39.77	71.77
TraesCS4B01G183900.1	Wheat	cytosol	39.1	71.21
TraesCS6D01G370800.1	Wheat	cytosol	39.1	71.21
TraesCS6A01G386200.1	Wheat	cytosol	39.1	71.21
TraesCS6A01G163100.1	Wheat	cytosol	38.44	70.86
TraesCS6D01G148000.1	Wheat	cytosol	38.77	70.82
TraesCS6B01G425200.1	Wheat	cytosol, peroxisome, plastid	38.77	70.61
TraesCS6B01G187400.1	Wheat	cytosol	38.6	70.52
TraesCS6D01G148200.1	Wheat	cytosol	38.6	70.52
HORVU6Hr1G032290.1	Barley	cytosol	31.28	70.41
TraesCS6B01G186100.1	Wheat	cytosol	38.44	70.21
TraesCS6A01G165100.1	Wheat	cytosol	38.44	70.21
TraesCS6A01G163200.1	Wheat	cytosol	36.77	69.94
TraesCS6D01G148600.1	Wheat	cytosol	37.77	69.0
HORVU4Hr1G053850.2	Barley	cytosol, plasma membrane	39.93	68.38
HORVU6Hr1G090040.1	Barley	cytosol	40.43	67.69
HORVU4Hr1G053770.1	Barley	cytosol	36.61	66.67
HORVU4Hr1G089750.2	Barley	cytosol	22.13	66.17
TraesCS3B01G068400.1	Wheat	cytosol	19.8	66.11
TraesCS3B01G068500.1	Wheat	cytosol	19.47	65.0
TraesCS4D01G184900.1	Wheat	plastid	39.93	62.5
Zm00001d033496_P001	Maize	cytosol	35.44	59.33
Zm00001d012829_P001	Maize	cytosol	11.31	59.13
Zm00001d013655_P001	Maize	cytosol	34.11	57.58
Zm00001d022557_P001	Maize	cytosol	34.78	57.58
Zm00001d047639_P004	Maize	extracellular	85.03	51.67
GSMUA_Achr11P...	Banana	cytosol	48.75	49.58
GSMUA_Achr5P21100_001	Banana	cytosol	24.63	46.98
GSMUA_Achr2P00420_001	Banana	cytosol	24.13	45.89
PGSC0003DMT400007275	Potato	cytosol	22.46	42.59
Solyc01g100490.2.1	Tomato	cytosol	22.46	42.59
CDX98807	Canola	cytosol	20.97	42.42
Bra005831.1-P	Field mustard	cytosol	22.13	41.56
VIT_14s0060g01190.t01	Wine grape	cytosol	22.3	41.49
CDX94325	Canola	cytosol	19.13	41.37
Bra018573.1-P	Field mustard	cytosol	21.96	40.87
HORVU6Hr1G090180.2	Barley	nucleus	41.43	40.82
CDY11321	Canola	cytosol	21.63	40.62
AT5G04950.1	Thale cress	cytosol	21.63	40.62
Bra038164.1-P	Field mustard	cytosol	21.8	40.56
CDX94991	Canola	cytosol	21.8	40.56
Bra009407.1-P	Field mustard	cytosol	20.63	40.39
CDY39002	Canola	cytosol	21.63	40.37
KRG96720	Soybean	cytosol	21.13	40.32
CDY69948	Canola	cytosol	18.64	40.29
CDX93517	Canola	cytosol	21.63	40.25
CDY42364	Canola	cytosol	21.46	40.06
CDX80931	Canola	cytosol	21.3	40.0
AT5G56080.1	Thale cress	cytosol	21.3	40.0
CDY17383	Canola	cytosol	21.3	40.0
AT1G56430.1	Thale cress	cytosol	21.46	39.81
AT1G09240.1	Thale cress	cytosol	21.13	39.69
CDY64985	Canola	cytosol	21.13	39.69
CDY28616	Canola	cytosol	21.13	39.69
CDY06526	Canola	cytosol	21.13	39.69
Bra035602.1-P	Field mustard	cytosol	21.13	39.69
KRH36982	Soybean	cytosol	20.3	39.48
CDX70180	Canola	cytosol	21.3	39.38
Bra002851.1-P	Field mustard	cytosol	20.97	39.38
KRH68436	Soybean	cytosol	20.63	38.63
CDY46596	Canola	cytosol	12.98	37.5
VIT_11s0052g01150.t01	Wine grape	plastid	17.3	36.62
HORVU3Hr1G010650.1	Barley	plastid	15.31	36.08
KRH43850	Soybean	cytosol	16.97	35.66
KRH13614	Soybean	cytosol	16.64	34.97
AT4G26483.1	Thale cress	cytosol, extracellular, plastid	4.83	34.52
Bra004521.1-P	Field mustard	cytosol	8.99	29.19
CDY01124	Canola	cytosol	4.33	20.63
CDY09316	Canola	cytosol	3.16	18.45

Protein Annotations

EntrezGene:103634563	MapMan:25.4.3.1.1	Gene3D:3.40.50.150	UniProt:A0A1D6K0A7	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030410
GO:GO:0030418	InterPro:IPR004298	InterPro:Nicotian_synth	ProteinID:ONL97243.1	PFAM:PF03059	PFscan:PS51142
PANTHER:PTHR32266	PANTHER:PTHR32266:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002217530	EnsemblPlantsGene:Zm00001d028887
EnsemblPlants:Zm00001d028887_P001	EnsemblPlants:Zm00001d028887_T001	:	:	:	:

Description

nicotianamine synthase9 nicotianamine synthase9

Coordinates

chr1:+:49660780..49662585

Molecular Weight (calculated)

65943.3 Da

IEP (calculated)

6.542

GRAVY (calculated)

-0.024

Length

601 amino acids

Sequence
(BLAST)

001: MEAQNVEVAA LVKKIADLHA DITKLPSLSP SPDVNALFTS LVMACVPPST VDVTKLSPDS QRMREELIRL CSDAEGHLEA HYADMLAAFD NPLDHLGRFP
101: YFSNYINLSK LEYDLLVRYI PGLAPSRVAF VGSGPLPFSS LVLAARHLPN TTFDNYDRCA AANDRARKLV RADKDLNARM SFHTVDVANL TDDLGKYDVV
201: FLAALVGMAA EDKAKVVVHL GRHMADGAAL VVRSAHGARG FLYPIVDPED IRRGGFDVLT VYHPDDEVIN SVIIARKIDA HANTEVSALV QKITGLHAAI
301: NKLPSLSPSP DVDALFTELV MACVPPSPVD VTKLGTDAQR MREELIRLCS DAEGHLEAHY ADMLAAFDNP LDHLGRFPYF NNYVNLSKLE YDLLVRYVPG
401: IAPSRIAFVG SGPLPFSSLV LASRHLPNVM FDNYDRCAAA NDRARKLVRA DEGLRKRMFF HTADVANLTD ELRKYDVVFL AALVGMAAED KAKVATHLGR
501: HMADGAALIV RSAHEARGFL YPIVDPEDIR RSGFDVLAVY HPDDEVINSV IVARKINAHV KGLQDGHAHA RGVVPIVSPP CKCCKMEANT LHQKREEMAT
601: A

Best Arabidopsis Sequence Match ( AT1G56430.1 )
(BLAST)

001: MGYCQDDQLV NKICDLYEKI SKLETLKPCE DVDTLFKQLV STCIPPNPNI DVTKMSENIQ EMRSNLIKIC GEAEGYLEHH FSSILTSFED NPLHHLNLFP
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT

Arabidopsis Description

NAS4Probable nicotianamine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.