Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
iPSORT:secretory
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G187400.1 Wheat cytosol 98.48 98.48
TraesCS6A01G165100.1 Wheat cytosol 97.26 97.26
TraesCS6D01G148200.1 Wheat cytosol 97.26 97.26
TraesCS6D01G148600.1 Wheat cytosol 96.96 96.96
HORVU6Hr1G032290.1 Barley cytosol 77.51 95.51
Os03t0307200-01 Rice endoplasmic reticulum 75.08 75.77
TraesCS6D01G370800.1 Wheat cytosol 74.77 74.55
TraesCS2D01G049200.1 Wheat cytosol 74.16 73.94
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 72.04 72.48
Zm00001d047658_P001 Maize cytosol 72.04 72.48
Zm00001d047656_P001 Maize cytosol 70.82 71.25
TraesCS2D01G033000.1 Wheat peroxisome 61.7 68.35
TraesCS4D01G184900.1 Wheat plastid 76.9 65.89
TraesCS2D01G094200.1 Wheat cytosol 62.01 60.0
TraesCS3D01G055800.1 Wheat cytosol 35.26 53.95
TraesCS6D01G382900.1 Wheat cytosol, plastid 49.24 49.39
GSMUA_Achr2P00420_001 Banana cytosol 45.29 47.15
GSMUA_Achr5P21100_001 Banana cytosol 44.38 46.35
KRG96720 Soybean cytosol 39.82 41.59
PGSC0003DMT400007275 Potato cytosol 39.82 41.32
KXG39528 Sorghum cytosol 75.38 41.06
Solyc01g100490.2.1 Tomato cytosol 39.51 41.01
KRH36982 Soybean cytosol 37.99 40.45
VIT_14s0060g01190.t01 Wine grape cytosol 39.51 40.25
KRH68436 Soybean cytosol 39.21 40.19
Bra038164.1-P Field mustard cytosol 38.91 39.63
CDX94325 Canola cytosol 33.43 39.57
AT1G09240.1 Thale cress cytosol 38.3 39.38
Bra018573.1-P Field mustard cytosol 38.6 39.32
CDX94991 Canola cytosol 38.6 39.32
CDY39002 Canola cytosol 38.3 39.13
CDY42364 Canola cytosol 38.3 39.13
CDX93517 Canola cytosol 38.3 39.01
AT1G56430.1 Thale cress cytosol 38.3 38.89
CDY69948 Canola cytosol 32.83 38.85
Zm00001d028887_P001 Maize cytosol 70.82 38.77
AT5G04950.1 Thale cress cytosol 37.69 38.75
CDX98807 Canola cytosol 34.95 38.72
Zm00001d028888_P001 Maize cytosol, extracellular 70.52 38.6
CDY06526 Canola cytosol 37.08 38.12
AT5G56080.1 Thale cress cytosol 37.08 38.12
Bra005831.1-P Field mustard cytosol 37.08 38.12
Bra035602.1-P Field mustard cytosol 37.08 38.12
CDY64985 Canola cytosol 37.08 38.12
AT4G26483.1 Thale cress cytosol, extracellular, plastid 9.73 38.1
CDY17383 Canola cytosol 36.78 37.81
CDY28616 Canola cytosol 36.78 37.81
VIT_11s0052g01150.t01 Wine grape plastid 32.52 37.68
CDY11321 Canola cytosol 36.47 37.5
Bra002851.1-P Field mustard cytosol 36.47 37.5
CDY46596 Canola cytosol 23.71 37.5
Bra009407.1-P Field mustard cytosol 34.95 37.46
KRH43850 Soybean cytosol 32.52 37.41
CDX80931 Canola cytosol 36.17 37.19
KRH13614 Soybean cytosol 31.91 36.71
CDX70180 Canola cytosol 36.17 36.62
Bra004521.1-P Field mustard cytosol 15.81 28.11
Zm00001d047639_P004 Maize extracellular 72.95 24.27
GSMUA_Achr11P... Banana cytosol 43.47 24.2
CDY01124 Canola cytosol 8.81 23.02
CDY09316 Canola cytosol 6.38 20.39
Protein Annotations
EnsemblPlants:TraesCS6D01G148000.1EnsemblPlantsGene:TraesCS6D01G148000Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410GO:GO:0030418
InterPro:IPR004298InterPro:Nicotian_synthInterPro:SAM-dependent_MTasesncoils:CoilPANTHER:PTHR32266PANTHER:PTHR32266:SF10
PFAM:PF03059PFscan:PS51142SEG:segSUPFAM:SSF53335MapMan:25.4.3.1.1:
Description
No Description!
Coordinates
chr6D:+:121064488..121065477
Molecular Weight (calculated)
35148.0 Da
IEP (calculated)
5.692
GRAVY (calculated)
0.054
Length
329 amino acids
Sequence
(BLAST)
001: MDAQNKEVAA LIEKIAGLQA AIAALPSLSP SPEVDRLFTD LVTACVPPSS VDVTKLSPEH QRMREALIRL CSAAEGKLEA HYADLLATFD NPLDHLGRFP
101: YYSNYVNLSR LEYELLARHV PGIAPARVAF VGSGPLPFSS FVLAAHHLPD AHFDNYDLCG AANERARKLF GASEDGVGAR MKFHTADVAD LTQELGAYDV
201: VFLAALVGMA AEEKAKVIAH LGAHMVEGAS LVVRSAHGAR GFLYPIVDPE DIRRGGFEVL AVHHPEGEVI NSVIVARKAV DAQLSGPQNG DAHARGAVPL
301: VSPPCSFSTK MEAGALEKSE ELATKELAF
Best Arabidopsis Sequence Match ( AT4G26483.1 )
(BLAST)
1: MDPGALLMLR SARGLRSFLY VDVDPCDLKG FEVLEIYHPS MSDGFVNSVM VARKLTDRLI KYEWSRLEPY LWNKADDDFP NEAL
Arabidopsis Description
Nicotianamine synthase [Source:UniProtKB/TrEMBL;Acc:F4JUZ6]
SUBAcon: [plastid,extracellular,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.