Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42364 | Canola | cytosol | 94.72 | 94.72 |
| Bra038164.1-P | Field mustard | cytosol | 90.37 | 90.09 |
| AT1G56430.1 | Thale cress | cytosol | 82.61 | 82.1 |
| CDX93517 | Canola | cytosol | 75.16 | 74.92 |
| CDX94991 | Canola | cytosol | 72.98 | 72.76 |
| CDX98807 | Canola | cytosol | 58.07 | 62.96 |
| CDX80931 | Canola | cytosol | 60.25 | 60.62 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 60.56 | 60.37 |
| CDY11321 | Canola | cytosol | 59.94 | 60.31 |
| CDX94325 | Canola | cytosol | 50.93 | 58.99 |
| CDY64985 | Canola | cytosol | 58.39 | 58.75 |
| CDY06526 | Canola | cytosol | 58.39 | 58.75 |
| PGSC0003DMT400007275 | Potato | cytosol | 57.76 | 58.68 |
| Solyc01g100490.2.1 | Tomato | cytosol | 57.76 | 58.68 |
| CDY28616 | Canola | cytosol | 57.45 | 57.81 |
| KRG96720 | Soybean | cytosol | 56.52 | 57.78 |
| CDY69948 | Canola | cytosol | 49.69 | 57.55 |
| CDY17383 | Canola | cytosol | 57.14 | 57.5 |
| KRH68436 | Soybean | cytosol | 57.14 | 57.32 |
| CDX70180 | Canola | cytosol | 56.21 | 55.69 |
| KRH36982 | Soybean | cytosol | 50.93 | 53.07 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 50.0 | 51.11 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 47.83 | 48.73 |
| CDY09316 | Canola | cytosol | 15.22 | 47.57 |
| CDY46596 | Canola | cytosol | 30.12 | 46.63 |
| CDY01124 | Canola | cytosol | 17.7 | 45.24 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 36.65 | 44.19 |
| TraesCS2A01G033500.1 | Wheat | cytosol | 37.58 | 43.21 |
| Zm00001d012829_P001 | Maize | cytosol | 15.22 | 42.61 |
| TraesCS2D01G033000.1 | Wheat | peroxisome | 38.82 | 42.09 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 41.61 | 41.1 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 41.61 | 40.98 |
| Zm00001d047658_P001 | Maize | cytosol | 41.61 | 40.98 |
| TraesCS2B01G047100.2 | Wheat | cytosol | 39.44 | 40.84 |
| HORVU4Hr1G089750.2 | Barley | cytosol | 25.47 | 40.8 |
| Zm00001d047656_P001 | Maize | cytosol | 40.99 | 40.37 |
| TraesCS6A01G386200.1 | Wheat | cytosol | 40.99 | 40.0 |
| TraesCS2A01G049900.1 | Wheat | cytosol | 40.68 | 39.7 |
| TraesCS6D01G370800.1 | Wheat | cytosol | 40.68 | 39.7 |
| TraesCS6A01G093000.1 | Wheat | cytosol | 40.68 | 39.7 |
| HORVU4Hr1G053790.1 | Barley | cytosol | 40.68 | 39.7 |
| TraesCS3B01G068500.1 | Wheat | cytosol | 22.05 | 39.44 |
| TraesCS2B01G111100.1 | Wheat | cytosol | 41.61 | 39.41 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 40.37 | 39.39 |
| TraesCS2B01G060800.1 | Wheat | cytosol | 40.37 | 39.39 |
| TraesCS2D01G049200.1 | Wheat | cytosol | 40.37 | 39.39 |
| TraesCS6D01G382900.1 | Wheat | cytosol, plastid | 40.06 | 39.33 |
| TraesCS2A01G095700.1 | Wheat | cytosol | 41.3 | 39.12 |
| TraesCS4B01G183900.1 | Wheat | cytosol | 40.06 | 39.09 |
| TraesCSU01G125200.1 | Wheat | cytosol | 40.37 | 39.04 |
| TraesCSU01G125500.1 | Wheat | cytosol | 40.37 | 39.04 |
| TraesCS6B01G438900.1 | Wheat | cytosol, plastid | 39.75 | 39.02 |
| TraesCS3B01G068400.1 | Wheat | cytosol | 21.74 | 38.89 |
| TraesCS5A01G552400.1 | Wheat | cytosol | 40.06 | 38.74 |
| TraesCS6A01G398700.1 | Wheat | cytosol, plastid | 39.44 | 38.72 |
| TraesCS6A01G163100.1 | Wheat | cytosol | 39.13 | 38.65 |
| TraesCS6B01G187400.1 | Wheat | cytosol | 39.44 | 38.6 |
| TraesCS2D01G094200.1 | Wheat | cytosol | 40.68 | 38.53 |
| HORVU2Hr1G015980.1 | Barley | cytosol | 40.68 | 38.53 |
| Os07t0689600-01 | Rice | cytosol | 40.99 | 38.48 |
| TraesCS5A01G552000.1 | Wheat | cytosol | 39.75 | 38.44 |
| TraesCS6A01G165100.1 | Wheat | cytosol | 39.13 | 38.3 |
| TraesCS6D01G148000.1 | Wheat | cytosol | 39.13 | 38.3 |
| TraesCS6B01G186100.1 | Wheat | cytosol | 39.13 | 38.3 |
| TraesCS6D01G148600.1 | Wheat | cytosol | 38.82 | 37.99 |
| TraesCS6D01G148200.1 | Wheat | cytosol | 38.82 | 37.99 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 36.96 | 37.66 |
| HORVU4Hr1G053770.1 | Barley | cytosol | 38.51 | 37.58 |
| HORVU4Hr1G053850.2 | Barley | cytosol, plasma membrane | 40.68 | 37.32 |
| Zm00001d033496_P001 | Maize | cytosol | 40.99 | 36.77 |
| EER93732 | Sorghum | cytosol | 41.3 | 36.64 |
| HORVU6Hr1G090040.1 | Barley | cytosol | 40.68 | 36.49 |
| Zm00001d022557_P001 | Maize | cytosol | 40.68 | 36.09 |
| HORVU0Hr1G017720.1 | Barley | cytosol, plastid | 29.19 | 35.21 |
| Zm00001d013655_P001 | Maize | cytosol | 38.82 | 35.11 |
| TraesCS3A01G468300.1 | Wheat | plastid | 36.65 | 34.71 |
| TraesCS4D01G184900.1 | Wheat | plastid | 40.37 | 33.85 |
| HORVU2Hr1G004960.1 | Barley | mitochondrion | 37.27 | 29.93 |
| HORVU3Hr1G010650.1 | Barley | plastid | 22.67 | 28.63 |
| GSMUA_Achr11P... | Banana | cytosol | 49.07 | 26.73 |
| TraesCS3D01G055800.1 | Wheat | cytosol | 17.08 | 25.58 |
| HORVU4Hr1G089870.1 | Barley | cytosol | 16.46 | 25.24 |
| TraesCSU01G125100.1 | Wheat | cytosol, plasma membrane, vacuole | 7.45 | 23.08 |
| Zm00001d028887_P001 | Maize | cytosol | 40.37 | 21.63 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 40.06 | 21.46 |
| KXG39528 | Sorghum | cytosol | 40.06 | 21.36 |
| HORVU6Hr1G090180.2 | Barley | nucleus | 40.37 | 21.31 |
| Zm00001d047639_P004 | Maize | extracellular | 41.3 | 13.45 |
Protein Annotations
| MapMan:25.4.3.1.1 | Gene3D:3.40.50.150 | GO:A0A078HM79 | UniProt:A0A078HM79 | EnsemblPlants:CDY39002 | ProteinID:CDY39002 |
| ProteinID:CDY39002.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 | EnsemblPlantsGene:GSBRNA2T00067093001 | InterPro:IPR004298 |
| InterPro:Nicotian_synth | PFAM:PF03059 | PFscan:PS51142 | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF12 | MetaCyc:PWY-5912 |
| MetaCyc:PWY-5957 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI0004EE0F37 | : | : |
Description
BnaC01g27290DBnaC01g27290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HM79]
Coordinates
chrLK032437:+:227672..228840
Molecular Weight (calculated)
36170.5 Da
IEP (calculated)
5.187
GRAVY (calculated)
-0.052
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYCQDDKLV NTICDLYEKI SKLESLRPCE DVDTLFKQLV STCIPPNPNI DVTKMCESIQ EMRSNLIKLC GHAEGHLEHH FSSILTLFED NPLHHLNVFP
101: YYNNYLKLSK LEFDLLEQNL NGSVPKTVAF IGSGPLPLTS IVLASFHLKD SIFHNFDVDP SANSVAARLV SSDPDLSQRM FFHTVDVMDV TESLKDFDVV
201: FLAALVGMDK QEKIKVIEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LQGFQVLSVY HPTDEVINSV VISRKLVGDV VNHDHMDQAS ELACNCSQIH
301: AIMNKKKSIV EEFTGSIEEQ LS
101: YYNNYLKLSK LEFDLLEQNL NGSVPKTVAF IGSGPLPLTS IVLASFHLKD SIFHNFDVDP SANSVAARLV SSDPDLSQRM FFHTVDVMDV TESLKDFDVV
201: FLAALVGMDK QEKIKVIEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LQGFQVLSVY HPTDEVINSV VISRKLVGDV VNHDHMDQAS ELACNCSQIH
301: AIMNKKKSIV EEFTGSIEEQ LS
001: MGYCQDDQLV NKICDLYEKI SKLETLKPCE DVDTLFKQLV STCIPPNPNI DVTKMSENIQ EMRSNLIKIC GEAEGYLEHH FSSILTSFED NPLHHLNLFP
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
Arabidopsis Description
NAS4Probable nicotianamine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.