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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G068500.1 Wheat cytosol 80.1 89.44
TraesCS3B01G068400.1 Wheat cytosol 79.6 88.89
TraesCSU01G125500.1 Wheat cytosol 90.55 54.65
TraesCSU01G125200.1 Wheat cytosol 90.55 54.65
TraesCS2D01G049200.1 Wheat cytosol 89.05 54.24
TraesCS2B01G060800.1 Wheat cytosol 88.56 53.94
HORVU4Hr1G053790.1 Barley cytosol 87.56 53.33
TraesCS5A01G552400.1 Wheat cytosol 87.56 52.85
TraesCS2A01G049900.1 Wheat cytosol 86.57 52.73
TraesCS5A01G552000.1 Wheat cytosol 86.07 51.95
HORVU6Hr1G032290.1 Barley cytosol 68.66 51.69
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 87.06 49.86
HORVU6Hr1G090040.1 Barley cytosol 88.06 49.3
HORVU4Hr1G053770.1 Barley cytosol 79.1 48.18
Zm00001d047658_P001 Maize cytosol 69.15 42.51
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 69.15 42.51
Zm00001d047656_P001 Maize cytosol 67.16 41.28
AT4G26483.1 Thale cress cytosol, extracellular, plastid 16.92 40.48
Os03t0307200-01 Rice endoplasmic reticulum 63.68 39.26
HORVU3Hr1G010650.1 Barley plastid 47.26 37.25
HORVU2Hr1G015980.1 Barley cytosol 59.2 35.0
GSMUA_Achr2P00420_001 Banana cytosol 50.25 31.96
Solyc01g100490.2.1 Tomato cytosol 47.76 30.28
PGSC0003DMT400007275 Potato cytosol 46.27 29.34
HORVU6Hr1G090180.2 Barley nucleus 88.06 29.02
AT1G09240.1 Thale cress cytosol 45.77 28.75
GSMUA_Achr5P21100_001 Banana cytosol 44.78 28.57
KRH36982 Soybean cytosol 43.28 28.16
CDY17383 Canola cytosol 44.78 28.12
AT5G56080.1 Thale cress cytosol 44.78 28.12
Bra035602.1-P Field mustard cytosol 44.78 28.12
CDY06526 Canola cytosol 44.78 28.12
CDY64985 Canola cytosol 44.78 28.12
CDX94325 Canola cytosol 38.81 28.06
Bra002851.1-P Field mustard cytosol 44.28 27.81
CDY28616 Canola cytosol 44.28 27.81
KRG96720 Soybean cytosol 43.28 27.62
KRH68436 Soybean cytosol 43.78 27.41
CDX98807 Canola cytosol 40.3 27.27
CDY69948 Canola cytosol 37.31 26.98
CDX93517 Canola cytosol 43.28 26.93
CDX94991 Canola cytosol 43.28 26.93
Bra018573.1-P Field mustard cytosol 43.28 26.93
CDY11321 Canola cytosol 42.79 26.88
Bra009407.1-P Field mustard cytosol 40.8 26.71
VIT_14s0060g01190.t01 Wine grape cytosol 42.79 26.63
AT5G04950.1 Thale cress cytosol 42.29 26.56
Bra005831.1-P Field mustard cytosol 42.29 26.56
CDY42364 Canola cytosol 41.79 26.09
CDY46596 Canola cytosol 26.87 25.96
CDX80931 Canola cytosol 41.29 25.94
AT1G56430.1 Thale cress cytosol 41.79 25.93
Bra038164.1-P Field mustard cytosol 41.29 25.7
CDY39002 Canola cytosol 40.8 25.47
CDX70180 Canola cytosol 40.3 24.92
HORVU2Hr1G004960.1 Barley mitochondrion 47.76 23.94
KRH43850 Soybean cytosol 33.33 23.43
KRH13614 Soybean cytosol 33.33 23.43
KXG39528 Sorghum cytosol 68.16 22.68
VIT_11s0052g01150.t01 Wine grape plastid 31.84 22.54
Zm00001d028887_P001 Maize cytosol 66.17 22.13
HORVU0Hr1G017720.1 Barley cytosol, plastid 29.35 22.1
Zm00001d028888_P001 Maize cytosol, extracellular 64.68 21.63
GSMUA_Achr11P... Banana cytosol 47.76 16.24
Zm00001d047639_P004 Maize extracellular 68.66 13.95
Bra004521.1-P Field mustard cytosol 10.95 11.89
HORVU4Hr1G089870.1 Barley cytosol 6.47 6.19
CDY09316 Canola cytosol 0.0 0.0
CDY01124 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:HORVU4Hr1G089750.2EnsemblPlantsGene:HORVU4Hr1G089750Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410GO:GO:0030418
InterPro:IPR004298InterPro:Nicotian_synthInterPro:SAM-dependent_MTasesPANTHER:PTHR32266PANTHER:PTHR32266:SF10PFAM:PF03059
PFscan:PS51142SUPFAM:SSF53335UniParc:UPI000B479412UniProt:A0A287Q3N0MapMan:25.4.3.1.1:
Description
No Description!
Coordinates
chrchr4H:+:643497022..643497869
Molecular Weight (calculated)
21211.1 Da
IEP (calculated)
5.505
GRAVY (calculated)
0.068
Length
201 amino acids
Sequence
(BLAST)
001: SGPLPFSSFV LAARHLPDTM FDNYDLCGAA NDRASKLFRA DTDVGARMSF HTADVADLAS ELAKYDVVFL AALVGMAAED KAKVIVHLGA HMADGAALVV
101: RSAHGARGFL YPIVDPQDIG RGGFEVLAVC HPDDDVVNSV IIAQKSKEVH ADGLGSARGA GGQYARGTVP VVSPPCRFGE MVADVTQNHK RDEFANAEVA
201: F
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.