Factsheet for Zm00001d047651_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, extracellular
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

endoplasmic reticulum: 12913155

extracellular: 20408568

gfp PMID: 12913155 doi

D Mizuno, K Higuchi, T Sakamoto, H Nakanishi, S Mori, NK Nishizawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Science, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047658_P001	Maize	cytosol	100.0	100.0
Zm00001d047656_P001	Maize	cytosol	97.86	97.86
TraesCS6A01G093000.1	Wheat	cytosol	75.54	74.85
Os03t0307200-01	Rice	endoplasmic reticulum	74.01	74.23
TraesCS6A01G386200.1	Wheat	cytosol	74.31	73.64
TraesCS2D01G049200.1	Wheat	cytosol	74.31	73.64
TraesCS6D01G370800.1	Wheat	cytosol	74.31	73.64
TraesCS6B01G425200.1	Wheat	cytosol, peroxisome, plastid	74.01	73.33
HORVU6Hr1G032290.1	Barley	cytosol	59.63	73.03
TraesCS2A01G049900.1	Wheat	cytosol	73.7	73.03
HORVU4Hr1G053790.1	Barley	cytosol	73.7	73.03
TraesCS4B01G183900.1	Wheat	cytosol	73.39	72.73
TraesCS2B01G060800.1	Wheat	cytosol	73.39	72.73
TraesCSU01G125200.1	Wheat	cytosol	74.01	72.67
TraesCSU01G125500.1	Wheat	cytosol	74.01	72.67
TraesCS5A01G552000.1	Wheat	cytosol	73.7	72.37
TraesCS6A01G163100.1	Wheat	cytosol	71.87	72.09
TraesCS5A01G552400.1	Wheat	cytosol	73.39	72.07
TraesCS6D01G148000.1	Wheat	cytosol	72.48	72.04
TraesCS6A01G163200.1	Wheat	cytosol	69.42	71.84
TraesCS6B01G187400.1	Wheat	cytosol	72.17	71.73
TraesCS6D01G148200.1	Wheat	cytosol	72.17	71.73
TraesCS6B01G186100.1	Wheat	cytosol	71.87	71.43
TraesCS6A01G165100.1	Wheat	cytosol	71.87	71.43
TraesCS6D01G148600.1	Wheat	cytosol	70.64	70.21
TraesCS3B01G068400.1	Wheat	cytosol	38.53	70.0
HORVU4Hr1G089750.2	Barley	cytosol	42.51	69.15
TraesCS3B01G068500.1	Wheat	cytosol	37.92	68.89
HORVU4Hr1G053770.1	Barley	cytosol	69.11	68.48
HORVU4Hr1G053850.2	Barley	cytosol, plasma membrane	73.39	68.38
HORVU6Hr1G090040.1	Barley	cytosol	74.62	67.97
TraesCS4D01G184900.1	Wheat	plastid	75.23	64.06
Zm00001d012829_P001	Maize	cytosol	22.32	63.48
Zm00001d033496_P001	Maize	cytosol	65.75	59.89
Zm00001d022557_P001	Maize	cytosol	65.75	59.23
Zm00001d013655_P001	Maize	cytosol	63.3	58.15
GSMUA_Achr5P21100_001	Banana	cytosol	46.18	47.94
GSMUA_Achr2P00420_001	Banana	cytosol	46.18	47.78
Zm00001d028887_P001	Maize	cytosol	83.49	45.42
Zm00001d028888_P001	Maize	cytosol, extracellular	82.26	44.76
PGSC0003DMT400007275	Potato	cytosol	41.9	43.22
Solyc01g100490.2.1	Tomato	cytosol	41.9	43.22
CDX98807	Canola	cytosol	39.14	43.1
AT5G04950.1	Thale cress	cytosol	41.9	42.81
Bra018573.1-P	Field mustard	cytosol	42.2	42.72
Bra005831.1-P	Field mustard	cytosol	41.59	42.5
CDX94325	Canola	cytosol	36.09	42.45
CDX94991	Canola	cytosol	41.9	42.41
VIT_14s0060g01190.t01	Wine grape	cytosol	41.59	42.11
CDX93517	Canola	cytosol	41.59	42.11
Bra038164.1-P	Field mustard	cytosol	41.59	42.11
KRG96720	Soybean	cytosol	40.37	41.9
CDY11321	Canola	cytosol	40.98	41.88
CDY42364	Canola	cytosol	40.98	41.61
CDY39002	Canola	cytosol	40.98	41.61
CDX80931	Canola	cytosol	40.67	41.56
AT5G56080.1	Thale cress	cytosol	40.67	41.56
AT1G09240.1	Thale cress	cytosol	40.67	41.56
Bra009407.1-P	Field mustard	cytosol	38.84	41.37
AT1G56430.1	Thale cress	cytosol	40.98	41.36
CDY17383	Canola	cytosol	40.37	41.25
CDY69948	Canola	cytosol	34.86	41.01
Bra035602.1-P	Field mustard	cytosol	40.06	40.94
CDY64985	Canola	cytosol	40.06	40.94
CDY06526	Canola	cytosol	40.06	40.94
Bra002851.1-P	Field mustard	cytosol	39.76	40.62
CDY28616	Canola	cytosol	39.76	40.62
KRH68436	Soybean	cytosol	39.76	40.5
KRH36982	Soybean	cytosol	37.61	39.81
CDX70180	Canola	cytosol	39.45	39.69
HORVU6Hr1G090180.2	Barley	nucleus	74.01	39.67
CDY46596	Canola	cytosol	24.77	38.94
HORVU3Hr1G010650.1	Barley	plastid	29.05	37.25
VIT_11s0052g01150.t01	Wine grape	plastid	32.11	36.97
KRH43850	Soybean	cytosol	31.5	36.01
KRH13614	Soybean	cytosol	30.89	35.31
AT4G26483.1	Thale cress	cytosol, extracellular, plastid	8.87	34.52
Zm00001d047639_P004	Maize	extracellular	93.88	31.04
Bra004521.1-P	Field mustard	cytosol	17.43	30.81
GSMUA_Achr11P...	Banana	cytosol	44.04	24.37
CDY01124	Canola	cytosol	8.56	22.22
CDY09316	Canola	cytosol	6.42	20.39

Protein Annotations

MapMan:25.4.3.1.1	Gene3D:3.40.50.150	ProteinID:AQL07194.1	ProteinID:AQL07202.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030410
GO:GO:0030418	InterPro:IPR004298	UniProt:K7VEJ7	InterPro:Nicotian_synth	PFAM:PF03059	PFscan:PS51142
PANTHER:PTHR32266	PANTHER:PTHR32266:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000220C1C1	EnsemblPlantsGene:Zm00001d047651
EnsemblPlants:Zm00001d047651_P001	EnsemblPlants:Zm00001d047651_T001	:	:	:	:

Description

nicotianamine synthase1 nicotianamine synthase1

Coordinates

chr9:+:138081277..138082483

Molecular Weight (calculated)

35571.9 Da

IEP (calculated)

6.444

GRAVY (calculated)

0.009

Length

327 amino acids

Sequence
(BLAST)

001: MEAQNVEVAA LVQKITALHA DIAKLPSLSP SPDANALFTS LVMACVPPNP VDVTKLSPDV QGMREELIRL CSDAEGHLEA HYADMLAAFD NPLDHLGRFP
101: YFSNYIDLSK LEFDLLVRYI PGLAPSRVAF VGSGPLPFSS LVLAARHLPN TLFDNYDRCA AANDRARKLV RADKDLNARM SFHTVDVANL TDELAKYDVV
201: FLAALVGMAA EDKAKVVAHL GRHMADGAAL VVRSAHGARG FLYPIVDPED IRRGGFDVLA VYHPDNEVIN SVIIARKMDA HTKGLQNGHA HARGTVPIVS
301: PPCKCCKMEA NALQKREEMA TTTELSI

Best Arabidopsis Sequence Match ( AT1G56430.1 )
(BLAST)

001: MGYCQDDQLV NKICDLYEKI SKLETLKPCE DVDTLFKQLV STCIPPNPNI DVTKMSENIQ EMRSNLIKIC GEAEGYLEHH FSSILTSFED NPLHHLNLFP
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT

Arabidopsis Description

NAS4Probable nicotianamine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.