Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01124 | Canola | cytosol | 86.41 | 70.63 |
| Bra004521.1-P | Field mustard | cytosol | 82.52 | 45.95 |
| CDX94325 | Canola | cytosol | 85.44 | 31.65 |
| CDY69948 | Canola | cytosol | 82.52 | 30.58 |
| CDX98807 | Canola | cytosol | 57.28 | 19.87 |
| CDY11321 | Canola | cytosol | 57.28 | 18.44 |
| CDX80931 | Canola | cytosol | 56.31 | 18.12 |
| CDY64985 | Canola | cytosol | 56.31 | 18.12 |
| CDY06526 | Canola | cytosol | 56.31 | 18.12 |
| CDX70180 | Canola | cytosol | 56.31 | 17.85 |
| CDY28616 | Canola | cytosol | 55.34 | 17.81 |
| CDY17383 | Canola | cytosol | 55.34 | 17.81 |
| CDX93517 | Canola | cytosol | 50.49 | 16.1 |
| CDX94991 | Canola | cytosol | 49.51 | 15.79 |
| CDY42364 | Canola | cytosol | 48.54 | 15.53 |
| CDY39002 | Canola | cytosol | 47.57 | 15.22 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 44.66 | 14.24 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 42.72 | 13.97 |
| KRG96720 | Soybean | cytosol | 42.72 | 13.97 |
| KRH68436 | Soybean | cytosol | 42.72 | 13.71 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 40.78 | 13.29 |
| Solyc01g100490.2.1 | Tomato | cytosol | 39.81 | 12.93 |
| PGSC0003DMT400007275 | Potato | cytosol | 39.81 | 12.93 |
| HORVU0Hr1G017720.1 | Barley | cytosol, plastid | 32.04 | 12.36 |
| KRH36982 | Soybean | cytosol | 36.89 | 12.3 |
| TraesCS6B01G438900.1 | Wheat | cytosol, plastid | 33.01 | 10.37 |
| TraesCS6D01G382900.1 | Wheat | cytosol, plastid | 33.01 | 10.37 |
| TraesCS3D01G055800.1 | Wheat | cytosol | 21.36 | 10.23 |
| TraesCS6A01G398700.1 | Wheat | cytosol, plastid | 32.04 | 10.06 |
| HORVU4Hr1G089870.1 | Barley | cytosol | 19.42 | 9.52 |
| CDY46596 | Canola | cytosol | 17.48 | 8.65 |
| TraesCS3A01G468300.1 | Wheat | plastid | 27.18 | 8.24 |
| TraesCS2D01G033000.1 | Wheat | peroxisome | 21.36 | 7.41 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 23.3 | 7.27 |
| TraesCS2A01G033500.1 | Wheat | cytosol | 19.42 | 7.14 |
| TraesCS2B01G047100.2 | Wheat | cytosol | 21.36 | 7.07 |
| TraesCS2D01G094200.1 | Wheat | cytosol | 23.3 | 7.06 |
| TraesCS2B01G111100.1 | Wheat | cytosol | 23.3 | 7.06 |
| TraesCS2A01G049900.1 | Wheat | cytosol | 22.33 | 6.97 |
| TraesCS2B01G060800.1 | Wheat | cytosol | 22.33 | 6.97 |
| TraesCS6D01G370800.1 | Wheat | cytosol | 22.33 | 6.97 |
| TraesCS2D01G049200.1 | Wheat | cytosol | 22.33 | 6.97 |
| TraesCS4B01G183900.1 | Wheat | cytosol | 22.33 | 6.97 |
| TraesCS2A01G095700.1 | Wheat | cytosol | 22.33 | 6.76 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 21.36 | 6.75 |
| TraesCS6A01G163100.1 | Wheat | cytosol | 21.36 | 6.75 |
| TraesCSU01G125100.1 | Wheat | cytosol, plasma membrane, vacuole | 6.8 | 6.73 |
| TraesCS6A01G386200.1 | Wheat | cytosol | 21.36 | 6.67 |
| TraesCS6A01G093000.1 | Wheat | cytosol | 21.36 | 6.67 |
| HORVU4Hr1G053790.1 | Barley | cytosol | 21.36 | 6.67 |
| HORVU4Hr1G053770.1 | Barley | cytosol | 21.36 | 6.67 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 20.39 | 6.65 |
| TraesCSU01G125500.1 | Wheat | cytosol | 21.36 | 6.61 |
| TraesCSU01G125200.1 | Wheat | cytosol | 21.36 | 6.61 |
| TraesCS5A01G552400.1 | Wheat | cytosol | 21.36 | 6.61 |
| TraesCS5A01G552000.1 | Wheat | cytosol | 21.36 | 6.61 |
| Zm00001d047658_P001 | Maize | cytosol | 20.39 | 6.42 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 20.39 | 6.42 |
| TraesCS6B01G186100.1 | Wheat | cytosol | 20.39 | 6.38 |
| TraesCS6D01G148000.1 | Wheat | cytosol | 20.39 | 6.38 |
| TraesCS6D01G148200.1 | Wheat | cytosol | 20.39 | 6.38 |
| TraesCS6D01G148600.1 | Wheat | cytosol | 20.39 | 6.38 |
| TraesCS6B01G187400.1 | Wheat | cytosol | 20.39 | 6.38 |
| TraesCS6A01G165100.1 | Wheat | cytosol | 20.39 | 6.38 |
| HORVU4Hr1G053850.2 | Barley | cytosol, plasma membrane | 21.36 | 6.27 |
| GSMUA_Achr11P... | Banana | cytosol | 35.92 | 6.26 |
| HORVU2Hr1G015980.1 | Barley | cytosol | 20.39 | 6.18 |
| Os07t0689600-01 | Rice | cytosol | 20.39 | 6.12 |
| Zm00001d047656_P001 | Maize | cytosol | 19.42 | 6.12 |
| HORVU6Hr1G090040.1 | Barley | cytosol | 20.39 | 5.85 |
| TraesCS4D01G184900.1 | Wheat | plastid | 21.36 | 5.73 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 14.56 | 5.62 |
| Zm00001d022557_P001 | Maize | cytosol | 19.42 | 5.51 |
| Zm00001d033496_P001 | Maize | cytosol | 18.45 | 5.29 |
| EER93732 | Sorghum | cytosol | 18.45 | 5.23 |
| Zm00001d013655_P001 | Maize | cytosol | 17.48 | 5.06 |
| HORVU2Hr1G004960.1 | Barley | mitochondrion | 19.42 | 4.99 |
| HORVU6Hr1G090180.2 | Barley | nucleus | 20.39 | 3.44 |
| KXG39528 | Sorghum | cytosol | 19.42 | 3.31 |
| Zm00001d028887_P001 | Maize | cytosol | 18.45 | 3.16 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 17.48 | 3.0 |
| Zm00001d047639_P004 | Maize | extracellular | 20.39 | 2.12 |
| HORVU3Hr1G010650.1 | Barley | plastid | 3.88 | 1.57 |
| Zm00001d012829_P001 | Maize | cytosol | 0.0 | 0.0 |
| TraesCS3B01G068400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3B01G068500.1 | Wheat | cytosol | 0.0 | 0.0 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 0.0 | 0.0 |
| HORVU4Hr1G089750.2 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:25.4.3.1.1 | GO:A0A078F7D7 | UniProt:A0A078F7D7 | EnsemblPlants:CDY09316 | ProteinID:CDY09316 | ProteinID:CDY09316.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 | EnsemblPlantsGene:GSBRNA2T00001623001 | InterPro:IPR004298 |
| InterPro:Nicotian_synth | PFAM:PF03059 | PFscan:PS51142 | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF12 | MetaCyc:PWY-5912 |
| MetaCyc:PWY-5957 | UniParc:UPI0004EED51D | : | : | : | : |
Description
BnaC03g63460DBnaC03g63460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7D7]
Coordinates
chrLK031994:+:747687..747998
Molecular Weight (calculated)
11835.3 Da
IEP (calculated)
7.026
GRAVY (calculated)
-0.370
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MACQKAHFEK QILDLNNKMS NLKSLKPSNN VDNLFQQLMS TCLPTETNID VEKLCPKVQN IRTNLIKLRS EAIGYSEQHY STVLVSLEDN PLHHLDLYPC
101: LLH
101: LLH
001: MACQNNLVVK QIIDLYDQIS KLKSLKPSKN VDTLFGQLVS TCLPTDTNID VTNMCEEVKD MRANLIKLCG EAEGYLEQHF STILGSLQED QNPLDHLHIF
101: PYYSNYLKLG KLEFDLLSQH SSHVPTKIAF VGSGPMPLTS IVLAKFHLPN TTFHNFDIDS HANTLASNLV SRDPDLSKRM IFHTTDVLNA TEGLDQYDVV
201: FLAALVGMDK ESKVKAIEHL EKHMAPGAVL MLRSAHALRA FLYPIVDSSD LKGFQLLTIY HPTDDVVNSV VIARKLGGPT TPGVNGTRGC MFMPCNCSKI
301: HAIMNNRGKK NMIEEFSAIE
101: PYYSNYLKLG KLEFDLLSQH SSHVPTKIAF VGSGPMPLTS IVLAKFHLPN TTFHNFDIDS HANTLASNLV SRDPDLSKRM IFHTTDVLNA TEGLDQYDVV
201: FLAALVGMDK ESKVKAIEHL EKHMAPGAVL MLRSAHALRA FLYPIVDSSD LKGFQLLTIY HPTDDVVNSV VIARKLGGPT TPGVNGTRGC MFMPCNCSKI
301: HAIMNNRGKK NMIEEFSAIE
Arabidopsis Description
NAS1Nicotianamine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.