Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G398700.1 | Wheat | cytosol, plastid | 95.73 | 95.73 |
| TraesCS6D01G382900.1 | Wheat | cytosol, plastid | 93.29 | 93.29 |
| HORVU0Hr1G017720.1 | Barley | cytosol, plastid | 64.63 | 79.4 |
| TraesCS3B01G068500.1 | Wheat | cytosol | 28.35 | 51.67 |
| TraesCS3B01G068400.1 | Wheat | cytosol | 27.74 | 50.56 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 48.17 | 50.16 |
| TraesCS6B01G187400.1 | Wheat | cytosol | 50.0 | 49.85 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 50.0 | 49.7 |
| TraesCS6B01G186100.1 | Wheat | cytosol | 49.7 | 49.54 |
| TraesCS2B01G047100.2 | Wheat | cytosol | 46.65 | 49.2 |
| TraesCS2B01G060800.1 | Wheat | cytosol | 49.09 | 48.79 |
| TraesCS2B01G111100.1 | Wheat | cytosol | 50.3 | 48.53 |
| TraesCS4B01G183900.1 | Wheat | cytosol | 48.48 | 48.18 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 46.04 | 47.78 |
| CDX98807 | Canola | cytosol | 37.5 | 41.41 |
| Bra002851.1-P | Field mustard | cytosol | 40.24 | 41.25 |
| CDX94325 | Canola | cytosol | 34.76 | 41.01 |
| Bra035602.1-P | Field mustard | cytosol | 39.94 | 40.94 |
| CDY17383 | Canola | cytosol | 39.94 | 40.94 |
| CDY64985 | Canola | cytosol | 39.94 | 40.94 |
| CDY69948 | Canola | cytosol | 34.45 | 40.65 |
| Bra005831.1-P | Field mustard | cytosol | 39.63 | 40.62 |
| AT5G56080.1 | Thale cress | cytosol | 39.63 | 40.62 |
| AT5G04950.1 | Thale cress | cytosol | 39.63 | 40.62 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 39.94 | 40.56 |
| CDY11321 | Canola | cytosol | 39.33 | 40.31 |
| CDY28616 | Canola | cytosol | 39.33 | 40.31 |
| CDY06526 | Canola | cytosol | 39.33 | 40.31 |
| CDX80931 | Canola | cytosol | 39.02 | 40.0 |
| KRG96720 | Soybean | cytosol | 38.41 | 40.0 |
| Bra038164.1-P | Field mustard | cytosol | 39.33 | 39.94 |
| CDY42364 | Canola | cytosol | 39.02 | 39.75 |
| CDY39002 | Canola | cytosol | 39.02 | 39.75 |
| Bra009407.1-P | Field mustard | cytosol | 37.2 | 39.74 |
| KRH36982 | Soybean | cytosol | 36.89 | 39.16 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 33.84 | 39.08 |
| AT1G09240.1 | Thale cress | cytosol | 38.11 | 39.06 |
| PGSC0003DMT400007275 | Potato | cytosol | 37.5 | 38.8 |
| Solyc01g100490.2.1 | Tomato | cytosol | 37.5 | 38.8 |
| CDX93517 | Canola | cytosol | 38.11 | 38.7 |
| Bra018573.1-P | Field mustard | cytosol | 38.11 | 38.7 |
| AT1G56430.1 | Thale cress | cytosol | 38.11 | 38.58 |
| CDX94991 | Canola | cytosol | 37.8 | 38.39 |
| KRH68436 | Soybean | cytosol | 37.5 | 38.32 |
| CDX70180 | Canola | cytosol | 37.8 | 38.15 |
| KRH43850 | Soybean | cytosol | 31.1 | 35.66 |
| KRH13614 | Soybean | cytosol | 30.79 | 35.31 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 8.84 | 34.52 |
| CDY09316 | Canola | cytosol | 10.37 | 33.01 |
| CDY46596 | Canola | cytosol | 20.12 | 31.73 |
| Bra004521.1-P | Field mustard | cytosol | 17.68 | 31.35 |
| CDY01124 | Canola | cytosol | 11.89 | 30.95 |
| GSMUA_Achr11P... | Banana | cytosol | 47.26 | 26.23 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G438900.1 | EnsemblPlantsGene:TraesCS6B01G438900 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | InterPro:SAM-dependent_MTases | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 | PFAM:PF03059 |
| PFscan:PS51142 | SEG:seg | SUPFAM:SSF53335 | TIGR:cd02440 | MapMan:25.4.3.1.1 | : |
Description
No Description!
Coordinates
chr6B:-:704832093..704833079
Molecular Weight (calculated)
35029.4 Da
IEP (calculated)
7.738
GRAVY (calculated)
0.134
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCENKEAAA LVKKIAGLHA AISKLPSLSP SPEADALFTA LVAVCAPPSA AVDVAALGPR ARRMRADLVR LCADAEARLE ARCSDALAAL DAPLDHLRLF
101: PYHDNYVRLS ELEHALLSRH APDHLAVPAR VAFLGSGSLP LSALLLAARH MPDAAVDCFD RCAAANERAR RLLLRGNDNS RVAARMSFRT ADVEGLTHEL
201: AAYDVVFLAA PVGVAPEEKA RVIAHLGRHM AAGAALVVRS AHGARGFLCP VVEPAEVRRG GFQVLAVHHP DNAEMVYSVI VARKGYLELV PPVVSPPCNC
301: CEVEKARGSV PSTSCHLDAM DEIRRRAW
101: PYHDNYVRLS ELEHALLSRH APDHLAVPAR VAFLGSGSLP LSALLLAARH MPDAAVDCFD RCAAANERAR RLLLRGNDNS RVAARMSFRT ADVEGLTHEL
201: AAYDVVFLAA PVGVAPEEKA RVIAHLGRHM AAGAALVVRS AHGARGFLCP VVEPAEVRRG GFQVLAVHHP DNAEMVYSVI VARKGYLELV PPVVSPPCNC
301: CEVEKARGSV PSTSCHLDAM DEIRRRAW
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.