Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G068500.1 | Wheat | cytosol | 38.1 | 17.78 |
| TraesCS3B01G068400.1 | Wheat | cytosol | 38.1 | 17.78 |
| Zm00001d012829_P001 | Maize | cytosol | 23.81 | 17.39 |
| CDX94325 | Canola | cytosol | 57.14 | 17.27 |
| HORVU4Hr1G089750.2 | Barley | cytosol | 40.48 | 16.92 |
| CDY69948 | Canola | cytosol | 55.95 | 16.91 |
| AT5G56080.1 | Thale cress | cytosol | 48.81 | 12.81 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 38.1 | 11.98 |
| KRH36982 | Soybean | cytosol | 44.05 | 11.97 |
| AT5G04950.1 | Thale cress | cytosol | 45.24 | 11.88 |
| KRH68436 | Soybean | cytosol | 45.24 | 11.84 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 45.24 | 11.76 |
| KRG96720 | Soybean | cytosol | 44.05 | 11.75 |
| Solyc01g100490.2.1 | Tomato | cytosol | 44.05 | 11.67 |
| PGSC0003DMT400007275 | Potato | cytosol | 44.05 | 11.67 |
| AT1G09240.1 | Thale cress | cytosol | 44.05 | 11.56 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 41.67 | 11.11 |
| AT1G56430.1 | Thale cress | cytosol | 40.48 | 10.49 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 39.29 | 10.44 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 40.48 | 10.3 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 38.1 | 10.13 |
| TraesCS6D01G148600.1 | Wheat | cytosol | 39.29 | 10.03 |
| TraesCS2D01G049200.1 | Wheat | cytosol | 39.29 | 10.0 |
| TraesCS6A01G386200.1 | Wheat | cytosol | 39.29 | 10.0 |
| TraesCS5A01G552000.1 | Wheat | cytosol | 39.29 | 9.91 |
| TraesCSU01G125200.1 | Wheat | cytosol | 39.29 | 9.91 |
| TraesCSU01G125500.1 | Wheat | cytosol | 39.29 | 9.91 |
| TraesCS6A01G163100.1 | Wheat | cytosol | 38.1 | 9.82 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 38.1 | 9.82 |
| TraesCS6B01G186100.1 | Wheat | cytosol | 38.1 | 9.73 |
| TraesCS6A01G165100.1 | Wheat | cytosol | 38.1 | 9.73 |
| TraesCS6D01G148000.1 | Wheat | cytosol | 38.1 | 9.73 |
| TraesCS6A01G093000.1 | Wheat | cytosol | 38.1 | 9.7 |
| TraesCS6D01G370800.1 | Wheat | cytosol | 38.1 | 9.7 |
| TraesCS2B01G060800.1 | Wheat | cytosol | 38.1 | 9.7 |
| HORVU4Hr1G053770.1 | Barley | cytosol | 38.1 | 9.7 |
| HORVU4Hr1G053790.1 | Barley | cytosol | 38.1 | 9.7 |
| TraesCS6B01G187400.1 | Wheat | cytosol | 36.9 | 9.42 |
| TraesCS6D01G148200.1 | Wheat | cytosol | 36.9 | 9.42 |
| TraesCS2A01G095700.1 | Wheat | cytosol | 38.1 | 9.41 |
| TraesCS2A01G049900.1 | Wheat | cytosol | 36.9 | 9.39 |
| TraesCS5A01G552400.1 | Wheat | cytosol | 36.9 | 9.31 |
| TraesCS2D01G094200.1 | Wheat | cytosol | 36.9 | 9.12 |
| TraesCS2B01G111100.1 | Wheat | cytosol | 36.9 | 9.12 |
| HORVU2Hr1G015980.1 | Barley | cytosol | 36.9 | 9.12 |
| HORVU4Hr1G053850.2 | Barley | cytosol, plasma membrane | 38.1 | 9.12 |
| TraesCS4B01G183900.1 | Wheat | cytosol | 35.71 | 9.09 |
| TraesCS2A01G033500.1 | Wheat | cytosol | 29.76 | 8.93 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 34.52 | 8.87 |
| Zm00001d047658_P001 | Maize | cytosol | 34.52 | 8.87 |
| TraesCS6D01G382900.1 | Wheat | cytosol, plastid | 34.52 | 8.84 |
| TraesCS6B01G438900.1 | Wheat | cytosol, plastid | 34.52 | 8.84 |
| TraesCS2D01G033000.1 | Wheat | peroxisome | 30.95 | 8.75 |
| Os07t0689600-01 | Rice | cytosol | 35.71 | 8.75 |
| HORVU6Hr1G090040.1 | Barley | cytosol | 36.9 | 8.64 |
| Zm00001d047656_P001 | Maize | cytosol | 33.33 | 8.56 |
| TraesCS6A01G398700.1 | Wheat | cytosol, plastid | 33.33 | 8.54 |
| Zm00001d033496_P001 | Maize | cytosol | 35.71 | 8.36 |
| TraesCS4D01G184900.1 | Wheat | plastid | 38.1 | 8.33 |
| EER93732 | Sorghum | cytosol | 35.71 | 8.26 |
| Zm00001d022557_P001 | Maize | cytosol | 35.71 | 8.26 |
| Zm00001d013655_P001 | Maize | cytosol | 34.52 | 8.15 |
| TraesCS2B01G047100.2 | Wheat | cytosol | 29.76 | 8.04 |
| TraesCS3A01G468300.1 | Wheat | plastid | 30.95 | 7.65 |
| HORVU2Hr1G004960.1 | Barley | mitochondrion | 29.76 | 6.23 |
| GSMUA_Achr11P... | Banana | cytosol | 39.29 | 5.58 |
| HORVU6Hr1G090180.2 | Barley | nucleus | 36.9 | 5.08 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 35.71 | 4.99 |
| KXG39528 | Sorghum | cytosol | 35.71 | 4.97 |
| Zm00001d028887_P001 | Maize | cytosol | 34.52 | 4.83 |
| TraesCSU01G125100.1 | Wheat | cytosol, plasma membrane, vacuole | 5.95 | 4.81 |
| HORVU3Hr1G010650.1 | Barley | plastid | 13.1 | 4.31 |
| TraesCS3D01G055800.1 | Wheat | cytosol | 10.71 | 4.19 |
| Zm00001d047639_P004 | Maize | extracellular | 35.71 | 3.03 |
| HORVU0Hr1G017720.1 | Barley | cytosol, plastid | 8.33 | 2.62 |
| HORVU4Hr1G089870.1 | Barley | cytosol | 2.38 | 0.95 |
| CDY09316 | Canola | cytosol | 0.0 | 0.0 |
| CDY01124 | Canola | cytosol | 0.0 | 0.0 |
| Bra004521.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:10723109 | MapMan:25.4.3.1.1 | Gene3D:3.40.50.150 | ProteinID:AEE85207.1 | ArrayExpress:AT4G26483 | EnsemblPlantsGene:AT4G26483 |
| RefSeq:AT4G26483 | TAIR:AT4G26483 | RefSeq:AT4G26483-TAIR-G | EnsemblPlants:AT4G26483.1 | TAIR:AT4G26483.1 | Unigene:At.75539 |
| UniProt:F4JUZ6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 | InterPro:IPR004298 | RefSeq:NP_001190846.1 |
| InterPro:Nicotian_synth | PFAM:PF03059 | PFscan:PS51142 | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF12 | UniParc:UPI0001E93010 |
Description
Nicotianamine synthase [Source:UniProtKB/TrEMBL;Acc:F4JUZ6]
Coordinates
chr4:-:13376647..13376970
Molecular Weight (calculated)
9742.7 Da
IEP (calculated)
4.558
GRAVY (calculated)
-0.206
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MDPGALLMLR SARGLRSFLY VDVDPCDLKG FEVLEIYHPS MSDGFVNSVM VARKLTDRLI KYEWSRLEPY LWNKADDDFP NEAL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.