Factsheet for Zm00001d028888_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028887_P001	Maize	cytosol	97.0	97.0
KXG39528	Sorghum	cytosol	91.85	91.39
Zm00001d047658_P001	Maize	cytosol	44.76	82.26
Zm00001d047651_P001	Maize	cytosol, endoplasmic reticulum, extracellular	44.76	82.26
Zm00001d047656_P001	Maize	cytosol	43.59	80.12
Os03t0307200-01	Rice	endoplasmic reticulum	39.77	73.31
TraesCS2D01G049200.1	Wheat	cytosol	39.77	72.42
TraesCS6A01G093000.1	Wheat	cytosol	39.6	72.12
TraesCS2B01G060800.1	Wheat	cytosol	39.27	71.52
TraesCS2A01G049900.1	Wheat	cytosol	39.27	71.52
HORVU4Hr1G053790.1	Barley	cytosol	39.27	71.52
TraesCSU01G125200.1	Wheat	cytosol	39.6	71.47
TraesCSU01G125500.1	Wheat	cytosol	39.6	71.47
TraesCS5A01G552000.1	Wheat	cytosol	39.27	70.87
TraesCS5A01G552400.1	Wheat	cytosol	39.1	70.57
TraesCS6A01G163100.1	Wheat	cytosol	38.27	70.55
TraesCS6D01G148000.1	Wheat	cytosol	38.6	70.52
TraesCS4B01G183900.1	Wheat	cytosol	38.6	70.3
TraesCS6D01G370800.1	Wheat	cytosol	38.6	70.3
TraesCS6A01G386200.1	Wheat	cytosol	38.6	70.3
TraesCS6D01G148200.1	Wheat	cytosol	38.44	70.21
TraesCS6B01G187400.1	Wheat	cytosol	38.44	70.21
HORVU6Hr1G032290.1	Barley	cytosol	31.11	70.04
TraesCS6A01G163200.1	Wheat	cytosol	36.77	69.94
TraesCS6A01G165100.1	Wheat	cytosol	38.27	69.91
TraesCS6B01G425200.1	Wheat	cytosol, peroxisome, plastid	38.27	69.7
TraesCS6B01G186100.1	Wheat	cytosol	38.1	69.6
TraesCS6D01G148600.1	Wheat	cytosol	37.6	68.69
HORVU4Hr1G053850.2	Barley	cytosol, plasma membrane	39.6	67.81
HORVU6Hr1G090040.1	Barley	cytosol	39.77	66.57
TraesCS3B01G068400.1	Wheat	cytosol	19.8	66.11
HORVU4Hr1G053770.1	Barley	cytosol	36.11	65.76
TraesCS3B01G068500.1	Wheat	cytosol	19.47	65.0
HORVU4Hr1G089750.2	Barley	cytosol	21.63	64.68
Zm00001d012829_P001	Maize	cytosol	11.81	61.74
TraesCS4D01G184900.1	Wheat	plastid	39.43	61.72
Zm00001d033496_P001	Maize	cytosol	34.78	58.22
Zm00001d022557_P001	Maize	cytosol	34.44	57.02
Zm00001d013655_P001	Maize	cytosol	33.61	56.74
Zm00001d047639_P004	Maize	extracellular	84.53	51.37
GSMUA_Achr11P...	Banana	cytosol	48.25	49.07
GSMUA_Achr5P21100_001	Banana	cytosol	24.79	47.3
GSMUA_Achr2P00420_001	Banana	cytosol	23.63	44.94
PGSC0003DMT400007275	Potato	cytosol	22.63	42.9
Solyc01g100490.2.1	Tomato	cytosol	22.63	42.9
VIT_14s0060g01190.t01	Wine grape	cytosol	22.3	41.49
CDX98807	Canola	cytosol	20.47	41.41
Bra005831.1-P	Field mustard	cytosol	21.63	40.62
Bra038164.1-P	Field mustard	cytosol	21.8	40.56
Bra018573.1-P	Field mustard	cytosol	21.8	40.56
KRG96720	Soybean	cytosol	21.13	40.32
CDX94325	Canola	cytosol	18.64	40.29
CDX94991	Canola	cytosol	21.63	40.25
AT1G56430.1	Thale cress	cytosol	21.63	40.12
CDY39002	Canola	cytosol	21.46	40.06
HORVU6Hr1G090180.2	Barley	nucleus	40.6	40.0
CDY42364	Canola	cytosol	21.3	39.75
Bra009407.1-P	Field mustard	cytosol	20.3	39.74
AT5G04950.1	Thale cress	cytosol	21.13	39.69
CDY11321	Canola	cytosol	21.13	39.69
CDX93517	Canola	cytosol	21.3	39.63
AT5G56080.1	Thale cress	cytosol	20.97	39.38
CDY06526	Canola	cytosol	20.97	39.38
CDY17383	Canola	cytosol	20.97	39.38
CDY28616	Canola	cytosol	20.97	39.38
CDY64985	Canola	cytosol	20.97	39.38
Bra035602.1-P	Field mustard	cytosol	20.97	39.38
CDY69948	Canola	cytosol	18.14	39.21
KRH36982	Soybean	cytosol	20.13	39.16
CDX80931	Canola	cytosol	20.8	39.06
Bra002851.1-P	Field mustard	cytosol	20.8	39.06
AT1G09240.1	Thale cress	cytosol	20.8	39.06
KRH68436	Soybean	cytosol	20.8	38.94
CDX70180	Canola	cytosol	20.8	38.46
VIT_11s0052g01150.t01	Wine grape	plastid	17.14	36.27
HORVU3Hr1G010650.1	Barley	plastid	15.31	36.08
CDY46596	Canola	cytosol	12.48	36.06
AT4G26483.1	Thale cress	cytosol, extracellular, plastid	4.99	35.71
KRH43850	Soybean	cytosol	16.81	35.31
KRH13614	Soybean	cytosol	16.64	34.97
Bra004521.1-P	Field mustard	cytosol	8.65	28.11
CDY01124	Canola	cytosol	4.16	19.84
CDY09316	Canola	cytosol	3.0	17.48

Protein Annotations

MapMan:25.4.3.1.1	Gene3D:3.40.50.150	UniProt:A0A1D6K0A8	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030410	GO:GO:0030418
InterPro:IPR004298	InterPro:Nicotian_synth	ProteinID:ONL97244.1	PFAM:PF03059	PFscan:PS51142	PANTHER:PTHR32266
PANTHER:PTHR32266:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI00022210EC	EnsemblPlantsGene:Zm00001d028888	EnsemblPlants:Zm00001d028888_P001
EnsemblPlants:Zm00001d028888_T001	:	:	:	:	:

Description

nicotianamine synthase2 nicotianamine synthase2

Coordinates

chr1:+:49731260..49733065

Molecular Weight (calculated)

65847.2 Da

IEP (calculated)

6.541

GRAVY (calculated)

-0.002

Length

601 amino acids

Sequence
(BLAST)

001: MEAQNVEVAA LVKKIADLHA DITKLPSLSP SPDVNALFTS LVMACVPPST VDVTKLSPDS QRMREELIRL CSDAEGHLEA HYADMLAAFD NPLDHLGRFP
101: YFSNYINLSK LEYDLLVRYI PGLAPSRVAF VGSGPLPFSS LVLAARHLPN TTFDNYDRCA AANDRARKLV RADKDLNARM SFHTVDVANL TDDLGKYDVV
201: FLAALVGMAA EDKAKVVAHL GRHMADGAAL VVRSAHGARG FLYPIVDPED IRRGGFDVLT VYHPDDEVIN SVIIARKIDA HTNTEVSALV QKITGLHAAI
301: NKLPSLSPSP DVDALFTELV MACVPPSPVD VTKLGTDAQR MREELIRLCC DAEGHLEAHY ADMLAAFDNP LDHLGRFPYF NNYVNLSKLE YDLLVRYVTG
401: IAPSRIAFVG SDPLPFSSLV LASRHLPNVM FDNYDRCAAA NDRARKLVRA DEGLRKQMFF HTADVANLTD ELRKYDVVFL AALVGMAAED KAKVVAHLGR
501: HMVDGAALVV RSAHGARGFL YPIVDPEDIR RGGFDVLAVY HPDDEVINSV IVARKINAHV KGLQDGHAHA RGAVPIVSPP CKCCKMVANT LHQKREEMAT
601: A

Best Arabidopsis Sequence Match ( AT5G04950.1 )
(BLAST)

001: MACQNNLVVK QIIDLYDQIS KLKSLKPSKN VDTLFGQLVS TCLPTDTNID VTNMCEEVKD MRANLIKLCG EAEGYLEQHF STILGSLQED QNPLDHLHIF
101: PYYSNYLKLG KLEFDLLSQH SSHVPTKIAF VGSGPMPLTS IVLAKFHLPN TTFHNFDIDS HANTLASNLV SRDPDLSKRM IFHTTDVLNA TEGLDQYDVV
201: FLAALVGMDK ESKVKAIEHL EKHMAPGAVL MLRSAHALRA FLYPIVDSSD LKGFQLLTIY HPTDDVVNSV VIARKLGGPT TPGVNGTRGC MFMPCNCSKI
301: HAIMNNRGKK NMIEEFSAIE

Arabidopsis Description

NAS1Nicotianamine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF79]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.