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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
MultiLoc:cytosol
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G183900.1 Wheat cytosol 94.85 94.85
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 99.7 93.73
HORVU4Hr1G053770.1 Barley cytosol 89.09 89.09
HORVU4Hr1G089750.2 Barley cytosol 53.33 87.56
HORVU6Hr1G090040.1 Barley cytosol 92.12 84.68
TraesCS4D01G184900.1 Wheat plastid 95.15 81.77
HORVU6Hr1G032290.1 Barley cytosol 60.91 75.28
Zm00001d047658_P001 Maize cytosol 73.03 73.7
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 73.03 73.7
Os03t0307200-01 Rice endoplasmic reticulum 71.21 72.09
Zm00001d047656_P001 Maize cytosol 71.21 71.87
HORVU4Hr1G089870.1 Barley cytosol 40.91 64.29
HORVU2Hr1G015980.1 Barley cytosol 63.33 61.47
HORVU2Hr1G004960.1 Barley mitochondrion 60.61 49.88
HORVU6Hr1G090180.2 Barley nucleus 91.52 49.51
GSMUA_Achr2P00420_001 Banana cytosol 46.06 48.1
GSMUA_Achr5P21100_001 Banana cytosol 45.76 47.94
HORVU0Hr1G017720.1 Barley cytosol, plastid 36.36 44.94
HORVU3Hr1G010650.1 Barley plastid 34.24 44.31
Bra018573.1-P Field mustard cytosol 41.82 42.72
CDX94991 Canola cytosol 41.82 42.72
Solyc01g100490.2.1 Tomato cytosol 40.91 42.59
AT1G09240.1 Thale cress cytosol 41.21 42.5
CDX98807 Canola cytosol 38.18 42.42
CDX93517 Canola cytosol 41.52 42.41
PGSC0003DMT400007275 Potato cytosol 40.61 42.27
CDY06526 Canola cytosol 40.91 42.19
Bra035602.1-P Field mustard cytosol 40.61 41.88
CDY64985 Canola cytosol 40.61 41.88
AT5G04950.1 Thale cress cytosol 40.61 41.88
AT5G56080.1 Thale cress cytosol 40.3 41.56
Bra002851.1-P Field mustard cytosol 40.0 41.25
CDY28616 Canola cytosol 40.0 41.25
CDY17383 Canola cytosol 40.0 41.25
Bra038164.1-P Field mustard cytosol 40.3 41.18
CDX94325 Canola cytosol 34.55 41.01
CDY42364 Canola cytosol 40.0 40.99
KXG39528 Sorghum cytosol 74.85 40.89
CDY39002 Canola cytosol 39.7 40.68
CDY11321 Canola cytosol 39.39 40.62
Bra005831.1-P Field mustard cytosol 39.39 40.62
AT1G56430.1 Thale cress cytosol 39.7 40.43
Bra009407.1-P Field mustard cytosol 37.58 40.39
CDX80931 Canola cytosol 39.09 40.31
VIT_14s0060g01190.t01 Wine grape cytosol 39.09 39.94
CDY69948 Canola cytosol 33.64 39.93
Zm00001d028887_P001 Maize cytosol 72.12 39.6
KRG96720 Soybean cytosol 37.58 39.37
Zm00001d028888_P001 Maize cytosol, extracellular 71.52 39.27
KRH68436 Soybean cytosol 38.18 39.25
CDX70180 Canola cytosol 38.48 39.08
KRH36982 Soybean cytosol 36.36 38.84
AT4G26483.1 Thale cress cytosol, extracellular, plastid 9.7 38.1
CDY46596 Canola cytosol 23.03 36.54
VIT_11s0052g01150.t01 Wine grape plastid 30.3 35.21
KRH43850 Soybean cytosol 30.3 34.97
KRH13614 Soybean cytosol 29.7 34.27
Bra004521.1-P Field mustard cytosol 16.36 29.19
GSMUA_Achr11P... Banana cytosol 44.24 24.7
CDY01124 Canola cytosol 9.39 24.6
Zm00001d047639_P004 Maize extracellular 73.03 24.37
CDY09316 Canola cytosol 6.67 21.36
Protein Annotations
EnsemblPlants:HORVU4Hr1G053790.1EnsemblPlantsGene:HORVU4Hr1G053790Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410GO:GO:0030418
InterPro:IPR004298InterPro:Nicotian_synthInterPro:SAM-dependent_MTasesPANTHER:PTHR32266PANTHER:PTHR32266:SF10PFAM:PF03059
PFscan:PS51142SUPFAM:SSF53335UniParc:UPI000B4777A0UniProt:A0A287P384MapMan:25.4.3.1.1:
Description
No Description!
Coordinates
chrchr4H:-:448443268..448444673
Molecular Weight (calculated)
35366.1 Da
IEP (calculated)
5.065
GRAVY (calculated)
0.014
Length
330 amino acids
Sequence
(BLAST)
001: MDAQNKEVDA LVQKITGLHA AIAKLPSLSP SPDVDALFTD LVTACVPPSP VDVTKLGSEA QEMREGLIRL CSEAEGKLEA HYSDMLAAFD NPLDHLGMFP
101: YYSNYINLSK LEYELLARYV PGGIAPARVA FIGSGPLPFS SYVLAARHLP DAMFDNYDLC SAANDRASKL FRADKDVGAR MSFHTADVAD LTGELAAYDV
201: VFLAALVGMA AEDKAKVIAH LGAHMADGAA LVVRSAHGAR GFLYPIVDPQ DIGRGGFEVL AVCHPDDDVV NSVIIAHKSK DVHANERPNG RGGQYARGAV
301: PVVSPPCRFG EMVADVTHKR EEFTNAEVAF
Best Arabidopsis Sequence Match ( AT1G56430.1 )
(BLAST)
001: MGYCQDDQLV NKICDLYEKI SKLETLKPCE DVDTLFKQLV STCIPPNPNI DVTKMSENIQ EMRSNLIKIC GEAEGYLEHH FSSILTSFED NPLHHLNLFP
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
Arabidopsis Description
NAS4Probable nicotianamine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.