Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G055800.1 | Wheat | cytosol | 50.95 | 49.77 |
| TraesCSU01G125100.1 | Wheat | cytosol, plasma membrane, vacuole | 22.38 | 45.19 |
| HORVU4Hr1G053790.1 | Barley | cytosol | 64.29 | 40.91 |
| HORVU4Hr1G053850.2 | Barley | cytosol, plasma membrane | 63.81 | 38.18 |
| HORVU4Hr1G053770.1 | Barley | cytosol | 59.52 | 37.88 |
| HORVU6Hr1G090040.1 | Barley | cytosol | 62.86 | 36.77 |
| HORVU2Hr1G015980.1 | Barley | cytosol | 47.14 | 29.12 |
| HORVU2Hr1G004960.1 | Barley | mitochondrion | 53.81 | 28.18 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 33.33 | 26.22 |
| CDY01124 | Canola | cytosol | 14.29 | 23.81 |
| HORVU0Hr1G017720.1 | Barley | cytosol, plastid | 28.57 | 22.47 |
| HORVU6Hr1G090180.2 | Barley | nucleus | 62.38 | 21.48 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 30.0 | 20.0 |
| CDY09316 | Canola | cytosol | 9.52 | 19.42 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 28.57 | 18.99 |
| CDX98807 | Canola | cytosol | 25.71 | 18.18 |
| Bra004521.1-P | Field mustard | cytosol | 15.71 | 17.84 |
| Bra018573.1-P | Field mustard | cytosol | 27.14 | 17.65 |
| CDX94991 | Canola | cytosol | 26.67 | 17.34 |
| CDX93517 | Canola | cytosol | 26.19 | 17.03 |
| Bra009407.1-P | Field mustard | cytosol | 24.76 | 16.94 |
| CDY06526 | Canola | cytosol | 25.71 | 16.88 |
| AT5G56080.1 | Thale cress | cytosol | 25.71 | 16.88 |
| CDY64985 | Canola | cytosol | 25.71 | 16.88 |
| AT5G04950.1 | Thale cress | cytosol | 25.71 | 16.88 |
| Bra035602.1-P | Field mustard | cytosol | 25.71 | 16.88 |
| CDX94325 | Canola | cytosol | 21.9 | 16.55 |
| CDY69948 | Canola | cytosol | 21.9 | 16.55 |
| CDY39002 | Canola | cytosol | 25.24 | 16.46 |
| CDY42364 | Canola | cytosol | 25.24 | 16.46 |
| Bra038164.1-P | Field mustard | cytosol | 25.24 | 16.41 |
| CDX80931 | Canola | cytosol | 24.76 | 16.25 |
| Bra005831.1-P | Field mustard | cytosol | 24.76 | 16.25 |
| AT1G56430.1 | Thale cress | cytosol | 24.76 | 16.05 |
| CDX70180 | Canola | cytosol | 24.76 | 16.0 |
| CDY28616 | Canola | cytosol | 24.29 | 15.94 |
| CDY17383 | Canola | cytosol | 24.29 | 15.94 |
| CDY11321 | Canola | cytosol | 24.29 | 15.94 |
| Bra002851.1-P | Field mustard | cytosol | 24.29 | 15.94 |
| KRG96720 | Soybean | cytosol | 23.81 | 15.87 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 21.43 | 15.85 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 24.29 | 15.79 |
| Solyc01g100490.2.1 | Tomato | cytosol | 23.81 | 15.77 |
| PGSC0003DMT400007275 | Potato | cytosol | 23.81 | 15.77 |
| AT1G09240.1 | Thale cress | cytosol | 23.81 | 15.62 |
| KRH68436 | Soybean | cytosol | 23.33 | 15.26 |
| KRH36982 | Soybean | cytosol | 21.9 | 14.89 |
| KRH43850 | Soybean | cytosol | 20.0 | 14.69 |
| KRH13614 | Soybean | cytosol | 19.52 | 14.34 |
| CDY46596 | Canola | cytosol | 13.33 | 13.46 |
| HORVU3Hr1G010650.1 | Barley | plastid | 13.81 | 11.37 |
| GSMUA_Achr11P... | Banana | cytosol | 28.1 | 9.98 |
| HORVU4Hr1G089750.2 | Barley | cytosol | 6.19 | 6.47 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 0.95 | 2.38 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G089870.1 | EnsemblPlantsGene:HORVU4Hr1G089870 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | ncoils:Coil | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 | PFAM:PF03059 |
| PFscan:PS51142 | SEG:seg | UniParc:UPI000B4688A7 | UniProt:A0A287Q3Q8 | MapMan:25.4.3.1.1 | : |
Description
No Description!
Coordinates
chrchr4H:+:643649672..643650337
Molecular Weight (calculated)
18938.8 Da
IEP (calculated)
5.581
GRAVY (calculated)
0.009
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: AQNNNKDVAA LVEKITGLHA AIAKLPSLSP SPDVDALFTE LVTACVPPSP VDVTKLGPEA QEMREGLIRL CSEAEGKLEA HYSDMLAAFD NPLDHLGIFP
101: YYSNYINLSK LEYELLARYV PGGIAPVRVA FIXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXGCDR LSVHIQRVQN SCASGTLGLS LTSLACADMA
201: SEHMRPKGRS
101: YYSNYINLSK LEYELLARYV PGGIAPVRVA FIXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXGCDR LSVHIQRVQN SCASGTLGLS LTSLACADMA
201: SEHMRPKGRS
001: MGYCQDDQLV NKICDLYEKI SKLETLKPCE DVDTLFKQLV STCIPPNPNI DVTKMSENIQ EMRSNLIKIC GEAEGYLEHH FSSILTSFED NPLHHLNLFP
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
Arabidopsis Description
NAS4Probable nicotianamine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.