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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
MultiLoc:cytosol
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G094200.1 Wheat cytosol 84.12 84.12
TraesCS2A01G095700.1 Wheat cytosol 81.18 81.18
TraesCS2B01G111100.1 Wheat cytosol 80.88 80.88
Os07t0689600-01 Rice cytosol 69.41 68.8
Zm00001d012829_P001 Maize cytosol 23.24 68.7
Zm00001d013655_P001 Maize cytosol 69.71 66.57
EER93732 Sorghum cytosol 69.71 65.29
Zm00001d022557_P001 Maize cytosol 69.41 65.01
Zm00001d033496_P001 Maize cytosol 68.53 64.9
HORVU6Hr1G032290.1 Barley cytosol 50.88 64.79
HORVU4Hr1G053790.1 Barley cytosol 61.47 63.33
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 61.18 59.26
HORVU4Hr1G089750.2 Barley cytosol 35.0 59.2
HORVU4Hr1G053770.1 Barley cytosol 57.35 59.09
HORVU6Hr1G090040.1 Barley cytosol 61.18 57.94
GSMUA_Achr2P00420_001 Banana cytosol 47.06 50.63
GSMUA_Achr5P21100_001 Banana cytosol 45.29 48.89
HORVU4Hr1G089870.1 Barley cytosol 29.12 47.14
HORVU0Hr1G017720.1 Barley cytosol, plastid 36.18 46.07
HORVU2Hr1G004960.1 Barley mitochondrion 52.06 44.14
Solyc01g100490.2.1 Tomato cytosol 40.88 43.85
PGSC0003DMT400007275 Potato cytosol 40.59 43.53
AT1G09240.1 Thale cress cytosol 39.41 41.88
CDX98807 Canola cytosol 36.47 41.75
KRG96720 Soybean cytosol 38.53 41.59
VIT_14s0060g01190.t01 Wine grape cytosol 39.41 41.49
CDX93517 Canola cytosol 39.41 41.49
AT5G04950.1 Thale cress cytosol 38.82 41.25
Bra018573.1-P Field mustard cytosol 39.12 41.18
CDX94991 Canola cytosol 38.82 40.87
KRH68436 Soybean cytosol 38.53 40.81
KRH36982 Soybean cytosol 37.06 40.78
CDY42364 Canola cytosol 38.53 40.68
CDY39002 Canola cytosol 38.53 40.68
CDY06526 Canola cytosol 38.24 40.62
CDY11321 Canola cytosol 38.24 40.62
CDX80931 Canola cytosol 38.24 40.62
Bra005831.1-P Field mustard cytosol 38.24 40.62
Bra038164.1-P Field mustard cytosol 38.53 40.56
AT1G56430.1 Thale cress cytosol 38.53 40.43
Bra009407.1-P Field mustard cytosol 36.47 40.39
Bra035602.1-P Field mustard cytosol 37.94 40.31
CDY64985 Canola cytosol 37.94 40.31
AT5G56080.1 Thale cress cytosol 37.94 40.31
Bra002851.1-P Field mustard cytosol 37.35 39.69
CDY17383 Canola cytosol 37.06 39.38
CDY28616 Canola cytosol 37.06 39.38
CDX94325 Canola cytosol 31.76 38.85
VIT_11s0052g01150.t01 Wine grape plastid 32.35 38.73
CDY69948 Canola cytosol 31.47 38.49
CDX70180 Canola cytosol 36.18 37.85
CDY46596 Canola cytosol 22.94 37.5
AT4G26483.1 Thale cress cytosol, extracellular, plastid 9.12 36.9
HORVU3Hr1G010650.1 Barley plastid 27.65 36.86
KRH43850 Soybean cytosol 30.59 36.36
KRH13614 Soybean cytosol 30.59 36.36
HORVU6Hr1G090180.2 Barley nucleus 61.47 34.26
Bra004521.1-P Field mustard cytosol 15.88 29.19
GSMUA_Achr11P... Banana cytosol 45.59 26.23
CDY01124 Canola cytosol 8.24 22.22
CDY09316 Canola cytosol 6.18 20.39
Protein Annotations
MapMan:25.4.3.1.1Gene3D:3.40.50.150UniProt:A0A287H5Z7GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410GO:GO:0030418
EnsemblPlantsGene:HORVU2Hr1G015980EnsemblPlants:HORVU2Hr1G015980.1InterPro:IPR004298InterPro:Nicotian_synthPFAM:PF03059PFscan:PS51142
PANTHER:PTHR32266PANTHER:PTHR32266:SF10InterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI000B47350ASEG:seg
Description
No Description!
Coordinates
chrchr2H:-:35995922..35997339
Molecular Weight (calculated)
36157.5 Da
IEP (calculated)
5.005
GRAVY (calculated)
0.068
Length
340 amino acids
Sequence
(BLAST)
001: MGMEGCCSNK KVMEEEALVK KITGLAAAIG ELPSLSPSPE VNALFTELVT SCIPPSTVDV DALGPDAQEM RARLIRLCAD AEGHLEAHYS DLLAAHDNPL
101: DHLTLFPYFN NYIKLSQLEH GLLARHVPGP APARVAFLGS GPLPLSSLVL AARHLPDASF DNYDISGEAN ERASRLVRAD ADAGARMAFR TADVADVTTE
201: LAGYDVVFLA ALVGMAAEEK ARLVEHLGRH MAPGAALVVR SAHGARGFLY PVVDPEEIRR GGFEVLTVHH PEDEVINSVI IARKAAAPPP VAADGDVPVN
301: MPMPAQCAVA VSRPCLGCAC ELGARAHQKM KEIAMEEMEA
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.