Factsheet for Zm00001d013655_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033496_P001	Maize	cytosol	78.65	77.99
EER93732	Sorghum	cytosol	75.56	74.1
Zm00001d022557_P001	Maize	cytosol	73.03	71.63
Os07t0689600-01	Rice	cytosol	68.82	71.43
HORVU2Hr1G015980.1	Barley	cytosol	66.57	69.71
Zm00001d012829_P001	Maize	cytosol	22.47	69.57
TraesCS2A01G095700.1	Wheat	cytosol	64.61	67.65
TraesCS2B01G111100.1	Wheat	cytosol	64.04	67.06
TraesCS2D01G094200.1	Wheat	cytosol	64.04	67.06
Zm00001d047651_P001	Maize	cytosol, endoplasmic reticulum, extracellular	58.15	63.3
Zm00001d047658_P001	Maize	cytosol	58.15	63.3
Zm00001d047656_P001	Maize	cytosol	56.46	61.47
GSMUA_Achr2P00420_001	Banana	cytosol	44.38	50.0
GSMUA_Achr5P21100_001	Banana	cytosol	44.1	49.84
KRG96720	Soybean	cytosol	37.08	41.9
PGSC0003DMT400007275	Potato	cytosol	36.8	41.32
KRH36982	Soybean	cytosol	35.67	41.1
Solyc01g100490.2.1	Tomato	cytosol	36.52	41.01
KRH68436	Soybean	cytosol	36.8	40.81
CDX98807	Canola	cytosol	33.99	40.74
AT1G09240.1	Thale cress	cytosol	36.24	40.31
VIT_14s0060g01190.t01	Wine grape	cytosol	36.24	39.94
CDX93517	Canola	cytosol	35.96	39.63
Bra009407.1-P	Field mustard	cytosol	33.99	39.41
AT5G04950.1	Thale cress	cytosol	35.39	39.38
Bra018573.1-P	Field mustard	cytosol	35.67	39.32
CDX94325	Canola	cytosol	30.62	39.21
AT1G56430.1	Thale cress	cytosol	35.67	39.2
Bra005831.1-P	Field mustard	cytosol	35.11	39.06
CDY11321	Canola	cytosol	35.11	39.06
CDY69948	Canola	cytosol	30.34	38.85
CDY39002	Canola	cytosol	35.11	38.82
CDX80931	Canola	cytosol	34.83	38.75
CDX94991	Canola	cytosol	35.11	38.7
CDY42364	Canola	cytosol	34.83	38.51
AT5G56080.1	Thale cress	cytosol	34.55	38.44
Bra038164.1-P	Field mustard	cytosol	34.55	38.08
VIT_11s0052g01150.t01	Wine grape	plastid	30.34	38.03
CDY64985	Canola	cytosol	33.71	37.5
Bra035602.1-P	Field mustard	cytosol	33.71	37.5
CDY06526	Canola	cytosol	33.71	37.5
CDY28616	Canola	cytosol	33.43	37.19
Bra002851.1-P	Field mustard	cytosol	33.43	37.19
CDX70180	Canola	cytosol	33.71	36.92
CDY17383	Canola	cytosol	33.15	36.88
KRH43850	Soybean	cytosol	28.65	35.66
KRH13614	Soybean	cytosol	28.65	35.66
CDY46596	Canola	cytosol	20.22	34.62
AT4G26483.1	Thale cress	cytosol, extracellular, plastid	8.15	34.52
Zm00001d028887_P001	Maize	cytosol	57.58	34.11
Zm00001d028888_P001	Maize	cytosol, extracellular	56.74	33.61
Bra004521.1-P	Field mustard	cytosol	14.04	27.03
GSMUA_Achr11P...	Banana	cytosol	43.54	26.23
Zm00001d047639_P004	Maize	extracellular	59.55	21.44
CDY01124	Canola	cytosol	6.74	19.05
CDY09316	Canola	cytosol	5.06	17.48

Protein Annotations

EntrezGene:100285295	MapMan:25.4.3.1.1	Gene3D:3.40.50.150	UniProt:A0A1D6GLB9	ProteinID:AQK64111.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0030410	GO:GO:0030418	InterPro:IPR004298	InterPro:Nicotian_synth	PFAM:PF03059	PFscan:PS51142
PANTHER:PTHR32266	PANTHER:PTHR32266:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002218785	EnsemblPlantsGene:Zm00001d013655
EnsemblPlants:Zm00001d013655_P001	EnsemblPlants:Zm00001d013655_T001	SEG:seg	:	:	:

Description

nicotianamine synthase 4 nicotianamine synthase 4

Coordinates

chr5:-:16353618..16354688

Molecular Weight (calculated)

38195.2 Da

IEP (calculated)

6.286

GRAVY (calculated)

0.083

Length

356 amino acids

Sequence
(BLAST)

001: MVVMGKHDDD EKQQQQMEME DVHEVGAVEV LPLENEAEAA LVRKISGLAA AIAKLPSLSP SPEVNALFTD LVTACIPRST VDVERLGPEL QRMRAGLIRR
101: CADAEAQLEA HYSDLLAALD SPLDHLPLFP YFGNYLLLGE LEHGLLARHV PGPPPARVAF VGSGPLPLSS LVLAARHLPA AAFDNYDICA EANGRARRLV
201: RADAALAARM AFRTSDVAHV TRGLATYDVV FLAALVGVAA EEKARVVEHL GRHMAPGAAL VVRSAHGARA FLYPVVDPDE IRRGGFDVLA VHHPEGEVIN
301: SVIVARKPVP VAGVGHAHAH AHGHGAVLSR PCCLCCEMEA RTHQKMEEVA MEQLPS

Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)

001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS

Arabidopsis Description

NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.