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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009407.1-P Field mustard cytosol 92.26 89.25
CDX80931 Canola cytosol 91.58 85.0
CDY11321 Canola cytosol 91.58 85.0
AT5G04950.1 Thale cress cytosol 91.25 84.69
CDX70180 Canola cytosol 91.58 83.69
CDY06526 Canola cytosol 83.84 77.81
CDY28616 Canola cytosol 83.17 77.19
CDY64985 Canola cytosol 82.15 76.25
CDY17383 Canola cytosol 81.82 75.94
CDX94325 Canola cytosol 62.96 67.27
CDY69948 Canola cytosol 62.63 66.91
CDX94991 Canola cytosol 63.64 58.51
CDY39002 Canola cytosol 62.96 58.07
CDY42364 Canola cytosol 62.96 58.07
CDX93517 Canola cytosol 62.96 57.89
CDY46596 Canola cytosol 40.4 57.69
KRG96720 Soybean cytosol 60.94 57.46
CDY09316 Canola cytosol 19.87 57.28
KRH68436 Soybean cytosol 60.94 56.39
VIT_14s0060g01190.t01 Wine grape cytosol 60.27 55.42
CDY01124 Canola cytosol 22.9 53.97
KRH36982 Soybean cytosol 53.54 51.46
Solyc01g100490.2.1 Tomato cytosol 54.55 51.1
PGSC0003DMT400007275 Potato cytosol 54.55 51.1
GSMUA_Achr2P00420_001 Banana cytosol 52.19 49.05
GSMUA_Achr5P21100_001 Banana cytosol 50.84 47.94
TraesCS2A01G033500.1 Wheat cytosol 40.07 42.5
TraesCS2D01G033000.1 Wheat peroxisome 42.09 42.09
Zm00001d012829_P001 Maize cytosol 16.16 41.74
HORVU6Hr1G032290.1 Barley cytosol 36.7 40.82
HORVU4Hr1G089750.2 Barley cytosol 27.27 40.3
TraesCS2B01G047100.2 Wheat cytosol 41.75 39.87
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 43.1 39.14
Zm00001d047658_P001 Maize cytosol 43.1 39.14
TraesCS6A01G386200.1 Wheat cytosol 43.43 39.09
TraesCS6D01G370800.1 Wheat cytosol 42.76 38.48
TraesCS2D01G049200.1 Wheat cytosol 42.76 38.48
TraesCS2B01G060800.1 Wheat cytosol 42.76 38.48
TraesCS2A01G049900.1 Wheat cytosol 42.76 38.48
TraesCS5A01G552000.1 Wheat cytosol 43.1 38.44
TraesCS3B01G068400.1 Wheat cytosol 23.23 38.33
Zm00001d047656_P001 Maize cytosol 42.09 38.23
HORVU4Hr1G053790.1 Barley cytosol 42.42 38.18
TraesCS5A01G552400.1 Wheat cytosol 42.76 38.14
TraesCSU01G125500.1 Wheat cytosol 42.76 38.14
TraesCSU01G125200.1 Wheat cytosol 42.76 38.14
TraesCS6D01G382900.1 Wheat cytosol, plastid 42.09 38.11
TraesCS6A01G093000.1 Wheat cytosol 42.09 37.88
TraesCS6B01G425200.1 Wheat cytosol, peroxisome, plastid 42.09 37.88
TraesCS3B01G068500.1 Wheat cytosol 22.9 37.78
TraesCS6B01G438900.1 Wheat cytosol, plastid 41.41 37.5
Os03t0307200-01 Rice endoplasmic reticulum 41.08 37.42
TraesCS4B01G183900.1 Wheat cytosol 41.41 37.27
TraesCS6A01G398700.1 Wheat cytosol, plastid 41.08 37.2
Os07t0689600-01 Rice cytosol 42.76 37.03
TraesCS2D01G094200.1 Wheat cytosol 42.09 36.76
HORVU2Hr1G015980.1 Barley cytosol 41.75 36.47
TraesCS2B01G111100.1 Wheat cytosol 41.75 36.47
TraesCS2A01G095700.1 Wheat cytosol 41.75 36.47
HORVU0Hr1G017720.1 Barley cytosol, plastid 32.32 35.96
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 42.42 35.9
HORVU4Hr1G053770.1 Barley cytosol 39.39 35.45
TraesCS6D01G148200.1 Wheat cytosol 39.06 35.26
TraesCS6A01G165100.1 Wheat cytosol 39.06 35.26
TraesCS6A01G163100.1 Wheat cytosol 38.38 34.97
TraesCS6B01G186100.1 Wheat cytosol 38.72 34.95
TraesCS6B01G187400.1 Wheat cytosol 38.72 34.95
TraesCS6D01G148000.1 Wheat cytosol 38.72 34.95
HORVU6Hr1G090040.1 Barley cytosol 42.09 34.82
TraesCS6D01G148600.1 Wheat cytosol 38.38 34.65
TraesCS6A01G163200.1 Wheat cytosol 36.7 34.49
Zm00001d013655_P001 Maize cytosol 40.74 33.99
Zm00001d033496_P001 Maize cytosol 40.4 33.43
TraesCS4D01G184900.1 Wheat plastid 42.42 32.81
EER93732 Sorghum cytosol 40.07 32.78
TraesCS3A01G468300.1 Wheat plastid 37.37 32.65
Zm00001d022557_P001 Maize cytosol 39.39 32.23
HORVU2Hr1G004960.1 Barley mitochondrion 40.4 29.93
TraesCS3D01G055800.1 Wheat cytosol 19.53 26.98
GSMUA_Achr11P... Banana cytosol 51.85 26.06
HORVU4Hr1G089870.1 Barley cytosol 18.18 25.71
HORVU3Hr1G010650.1 Barley plastid 21.21 24.71
TraesCSU01G125100.1 Wheat cytosol, plasma membrane, vacuole 7.74 22.12
Zm00001d028887_P001 Maize cytosol 42.42 20.97
HORVU6Hr1G090180.2 Barley nucleus 42.42 20.66
Zm00001d028888_P001 Maize cytosol, extracellular 41.41 20.47
KXG39528 Sorghum cytosol 41.41 20.36
Zm00001d047639_P004 Maize extracellular 43.43 13.04
Protein Annotations
MapMan:25.4.3.1.1Gene3D:3.40.50.150GO:A0A078ECN3EnsemblPlants:CDX98807ProteinID:CDX98807ProteinID:CDX98807.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016740GO:GO:0030410GO:GO:0030418EnsemblPlantsGene:GSBRNA2T00106904001InterPro:IPR004298InterPro:Nicotian_synth
PFAM:PF03059PFscan:PS51142PANTHER:PTHR32266PANTHER:PTHR32266:SF12MetaCyc:PWY-5912MetaCyc:PWY-5957
UniParc:UPI0004EEE38F:::::
Description
BnaC09g50280D
Coordinates
chrLK031907:-:80438..81408
Molecular Weight (calculated)
32929.7 Da
IEP (calculated)
6.122
GRAVY (calculated)
-0.048
Length
297 amino acids
Sequence
(BLAST)
001: MACKNNLVVK QIIDLYDQIS KLESLKPSKN VDTLFGQLVS TCLPTDTNID VTKMSEEVKD MRSNLIKLCG EAEGYLEQHF STILGSLLQE DQNPLDHLNI
101: FPYYNNYLKL GKLEFDLLSQ HSSHVPSKIA FIGSGPMPLT SIVLAKFHLP NTTFHNFDID SHANALATSL VSRDPDLSKR MFFHTTDVLN ATEGLDQYGV
201: VFLAALVGMD KEAKVKAIEH LEKHMAPGAV LMLRSAHALR AFLYPIVDSS DLKGFQLLTI FNPTDDVVNS VVIARKLGGS TTTNGKNKMI EEFSAIE
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.