Factsheet for Os03t0307200-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 24704865

gfp PMID: 24704865

T Nozoye, K Tsunoda, S Nagasaka, K Bashir, M Takahashi, T Kobayashi, H Nakanishi, NK Nishizawa

Graduate School of Agricultural and Life Sciences; The University of Tokyo; Tokyo, Japan., Graduate School of Agricultural and Life Sciences; The University of Tokyo; Tokyo, Japan; Research Institute for Bioresources and Biotechnology; Ishikawa Prefectural University; Ishikawa, Japan., Research Institute for Bioresources and Biotechnology; Ishikawa Prefectural University; Ishikawa, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G163100.1	Wheat	cytosol	75.77	75.77
TraesCS6B01G186100.1	Wheat	cytosol	76.38	75.68
TraesCS6A01G165100.1	Wheat	cytosol	76.07	75.38
TraesCS6B01G187400.1	Wheat	cytosol	76.07	75.38
TraesCS6D01G148000.1	Wheat	cytosol	75.77	75.08
TraesCS6A01G163200.1	Wheat	cytosol	72.7	75.0
TraesCS6D01G148200.1	Wheat	cytosol	75.46	74.77
HORVU6Hr1G032290.1	Barley	cytosol	60.74	74.16
Zm00001d047658_P001	Maize	cytosol	74.23	74.01
Zm00001d047651_P001	Maize	cytosol, endoplasmic reticulum, extracellular	74.23	74.01
TraesCS6D01G148600.1	Wheat	cytosol	74.54	73.86
Zm00001d047656_P001	Maize	cytosol	73.01	72.78
TraesCS6A01G386200.1	Wheat	cytosol	73.62	72.73
TraesCS6A01G093000.1	Wheat	cytosol	73.62	72.73
TraesCS6B01G425200.1	Wheat	cytosol, peroxisome, plastid	73.31	72.42
TraesCS6D01G370800.1	Wheat	cytosol	73.31	72.42
TraesCS4B01G183900.1	Wheat	cytosol	72.7	71.82
TraesCS2D01G049200.1	Wheat	cytosol	72.09	71.21
HORVU4Hr1G053790.1	Barley	cytosol	72.09	71.21
TraesCS2A01G049900.1	Wheat	cytosol	71.47	70.61
TraesCS2B01G060800.1	Wheat	cytosol	71.47	70.61
TraesCSU01G125500.1	Wheat	cytosol	71.78	70.27
TraesCSU01G125200.1	Wheat	cytosol	71.78	70.27
TraesCS5A01G552400.1	Wheat	cytosol	71.47	69.97
TraesCS5A01G552000.1	Wheat	cytosol	70.86	69.37
HORVU4Hr1G053850.2	Barley	cytosol, plasma membrane	71.78	66.67
HORVU6Hr1G090040.1	Barley	cytosol	73.01	66.3
HORVU4Hr1G053770.1	Barley	cytosol	66.87	66.06
TraesCS3B01G068500.1	Wheat	cytosol	35.89	65.0
TraesCS3B01G068400.1	Wheat	cytosol	35.58	64.44
HORVU4Hr1G089750.2	Barley	cytosol	39.26	63.68
TraesCS4D01G184900.1	Wheat	plastid	73.31	62.24
Os07t0689600-01	Rice	cytosol	64.42	61.22
GSMUA_Achr5P21100_001	Banana	cytosol	47.24	48.89
GSMUA_Achr2P00420_001	Banana	cytosol	46.01	47.47
PGSC0003DMT400007275	Potato	cytosol	40.8	41.96
Solyc01g100490.2.1	Tomato	cytosol	40.8	41.96
CDY42364	Canola	cytosol	41.1	41.61
CDY39002	Canola	cytosol	41.1	41.61
KRG96720	Soybean	cytosol	40.18	41.59
Bra018573.1-P	Field mustard	cytosol	41.1	41.49
Bra038164.1-P	Field mustard	cytosol	41.1	41.49
KXG39528	Sorghum	cytosol	76.69	41.39
AT5G04950.1	Thale cress	cytosol	40.49	41.25
CDX93517	Canola	cytosol	40.8	41.18
CDX98807	Canola	cytosol	37.42	41.08
AT1G09240.1	Thale cress	cytosol	40.18	40.94
VIT_14s0060g01190.t01	Wine grape	cytosol	40.49	40.87
CDX94991	Canola	cytosol	40.49	40.87
KRH36982	Soybean	cytosol	38.65	40.78
CDX94325	Canola	cytosol	34.66	40.65
AT5G56080.1	Thale cress	cytosol	39.88	40.62
CDY06526	Canola	cytosol	39.88	40.62
Zm00001d028887_P001	Maize	cytosol	74.54	40.43
AT1G56430.1	Thale cress	cytosol	40.18	40.43
HORVU3Hr1G010650.1	Barley	plastid	31.6	40.39
CDY64985	Canola	cytosol	39.57	40.31
Bra035602.1-P	Field mustard	cytosol	39.57	40.31
Bra005831.1-P	Field mustard	cytosol	39.26	40.0
CDY69948	Canola	cytosol	34.05	39.93
KRH68436	Soybean	cytosol	39.26	39.88
Zm00001d028888_P001	Maize	cytosol, extracellular	73.31	39.77
CDY11321	Canola	cytosol	38.96	39.69
Bra002851.1-P	Field mustard	cytosol	38.96	39.69
Bra009407.1-P	Field mustard	cytosol	37.12	39.41
CDX80931	Canola	cytosol	38.65	39.38
CDY28616	Canola	cytosol	38.65	39.38
CDY17383	Canola	cytosol	38.65	39.38
HORVU6Hr1G090180.2	Barley	nucleus	72.39	38.69
AT4G26483.1	Thale cress	cytosol, extracellular, plastid	9.82	38.1
VIT_11s0052g01150.t01	Wine grape	plastid	33.13	38.03
CDX70180	Canola	cytosol	37.73	37.85
KRH43850	Soybean	cytosol	32.21	36.71
CDY46596	Canola	cytosol	23.31	36.54
KRH13614	Soybean	cytosol	31.6	36.01
Bra004521.1-P	Field mustard	cytosol	16.87	29.73
GSMUA_Achr11P...	Banana	cytosol	44.79	24.7
Zm00001d047639_P004	Maize	extracellular	73.93	24.37
CDY01124	Canola	cytosol	9.2	23.81
CDY09316	Canola	cytosol	6.75	21.36

Protein Annotations

MapMan:25.4.3.1.1	Gene3D:3.40.50.150	EntrezGene:4332607	ProteinID:ABF95537.1	EMBL:AK112011	ProteinID:BAF11808.1
ProteinID:BAS83821.1	ProteinID:EAZ26661.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030410	GO:GO:0030418	InterPro:IPR004298
InterPro:Nicotian_synth	EnsemblPlantsGene:Os03g0307200	EnsemblPlants:Os03t0307200-01	PFAM:PF03059	PFscan:PS51142	PANTHER:PTHR32266
PANTHER:PTHR32266:SF10	UniProt:Q10MI9	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0000F18627	RefSeq:XP_015630628.1
SEG:seg	:	:	:	:	:

Description

NICOTIANAMINE SYNTHASE 2Nicotianamine synthase 2, Nicotianamine biosynthesis (Os03t0307200-01)

Coordinates

chr3:+:10926469..10927729

Molecular Weight (calculated)

34458.4 Da

IEP (calculated)

5.760

GRAVY (calculated)

0.184

Length

326 amino acids

Sequence
(BLAST)

001: MEAQNQEVAA LVEKIAGLHA AISKLPSLSP SAEVDALFTD LVTACVPASP VDVAKLGPEA QAMREELIRL CSAAEGHLEA HYADMLAAFD NPLDHLARFP
101: YYGNYVNLSK LEYDLLVRYV PGIAPTRVAF VGSGPLPFSS LVLAAHHLPD AVFDNYDRCG AANERARRLF RGADEGLGAR MAFHTADVAT LTGELGAYDV
201: VFLAALVGMA AEEKAGVIAH LGAHMADGAA LVVRSAHGAR GFLYPIVDLE DIRRGGFDVL AVYHPDDEVI NSVIVARKAD PRRGGGLAGA RGAVPVVSPP
301: CKCCKMEAAA GAFQKAEEFA AKRLSV

Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)

001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS

Arabidopsis Description

NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.