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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64985 Canola cytosol 96.56 96.56
CDY28616 Canola cytosol 92.5 92.5
CDY17383 Canola cytosol 91.88 91.88
AT5G56080.1 Thale cress cytosol 90.62 90.62
CDX98807 Canola cytosol 77.81 83.84
CDY11321 Canola cytosol 80.62 80.62
CDX80931 Canola cytosol 79.38 79.38
CDX70180 Canola cytosol 78.75 77.54
CDX94325 Canola cytosol 60.94 70.14
CDY69948 Canola cytosol 60.31 69.42
CDX94991 Canola cytosol 64.38 63.78
CDX93517 Canola cytosol 60.62 60.06
KRG96720 Soybean cytosol 58.75 59.68
CDY46596 Canola cytosol 38.44 59.13
KRH68436 Soybean cytosol 58.75 58.57
CDY39002 Canola cytosol 58.75 58.39
CDY42364 Canola cytosol 58.75 58.39
Solyc01g100490.2.1 Tomato cytosol 55.94 56.47
CDY09316 Canola cytosol 18.12 56.31
PGSC0003DMT400007275 Potato cytosol 55.62 56.15
VIT_14s0060g01190.t01 Wine grape cytosol 56.56 56.04
CDY01124 Canola cytosol 21.25 53.97
KRH36982 Soybean cytosol 51.56 53.4
GSMUA_Achr2P00420_001 Banana cytosol 50.62 51.27
GSMUA_Achr5P21100_001 Banana cytosol 48.12 48.89
HORVU4Hr1G089750.2 Barley cytosol 28.12 44.78
TraesCS3B01G068400.1 Wheat cytosol 24.69 43.89
HORVU6Hr1G032290.1 Barley cytosol 36.56 43.82
TraesCS3B01G068500.1 Wheat cytosol 24.38 43.33
Zm00001d012829_P001 Maize cytosol 15.31 42.61
TraesCS2A01G033500.1 Wheat cytosol 36.88 42.14
TraesCS2B01G060800.1 Wheat cytosol 42.5 41.21
TraesCS2D01G033000.1 Wheat peroxisome 38.12 41.08
HORVU4Hr1G053790.1 Barley cytosol 42.19 40.91
TraesCS2D01G049200.1 Wheat cytosol 42.19 40.91
TraesCS5A01G552000.1 Wheat cytosol 42.5 40.84
TraesCSU01G125200.1 Wheat cytosol 42.5 40.84
TraesCSU01G125500.1 Wheat cytosol 42.5 40.84
TraesCS2A01G049900.1 Wheat cytosol 41.88 40.61
TraesCS6D01G370800.1 Wheat cytosol 41.56 40.3
TraesCS5A01G552400.1 Wheat cytosol 41.88 40.24
Zm00001d047658_P001 Maize cytosol 40.94 40.06
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 40.94 40.06
TraesCS6B01G425200.1 Wheat cytosol, peroxisome, plastid 41.25 40.0
TraesCS6A01G386200.1 Wheat cytosol 41.25 40.0
TraesCS6A01G093000.1 Wheat cytosol 41.25 40.0
TraesCS4B01G183900.1 Wheat cytosol 41.25 40.0
Os03t0307200-01 Rice endoplasmic reticulum 40.62 39.88
TraesCS2B01G047100.2 Wheat cytosol 38.44 39.55
TraesCS6B01G438900.1 Wheat cytosol, plastid 40.31 39.33
Zm00001d047656_P001 Maize cytosol 40.0 39.14
TraesCS6D01G382900.1 Wheat cytosol, plastid 39.69 38.72
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 42.19 38.46
HORVU2Hr1G015980.1 Barley cytosol 40.62 38.24
TraesCS2A01G095700.1 Wheat cytosol 40.62 38.24
TraesCS2B01G111100.1 Wheat cytosol 40.62 38.24
TraesCS2D01G094200.1 Wheat cytosol 40.31 37.94
HORVU4Hr1G053770.1 Barley cytosol 39.06 37.88
TraesCS6A01G398700.1 Wheat cytosol, plastid 38.75 37.8
TraesCS6A01G165100.1 Wheat cytosol 38.75 37.69
Os07t0689600-01 Rice cytosol 40.31 37.61
TraesCS6A01G163100.1 Wheat cytosol 38.12 37.42
TraesCS6D01G148200.1 Wheat cytosol 38.44 37.39
TraesCS6D01G148000.1 Wheat cytosol 38.12 37.08
TraesCS6D01G148600.1 Wheat cytosol 38.12 37.08
TraesCS6B01G186100.1 Wheat cytosol 38.12 37.08
TraesCS6B01G187400.1 Wheat cytosol 37.81 36.78
HORVU6Hr1G090040.1 Barley cytosol 41.25 36.77
TraesCS6A01G163200.1 Wheat cytosol 36.25 36.71
TraesCS4D01G184900.1 Wheat plastid 41.88 34.9
Zm00001d033496_P001 Maize cytosol 38.12 33.98
EER93732 Sorghum cytosol 38.44 33.88
Zm00001d022557_P001 Maize cytosol 38.44 33.88
HORVU0Hr1G017720.1 Barley cytosol, plastid 28.12 33.71
Zm00001d013655_P001 Maize cytosol 37.5 33.71
TraesCS3A01G468300.1 Wheat plastid 35.62 33.53
HORVU2Hr1G004960.1 Barley mitochondrion 37.19 29.68
GSMUA_Achr11P... Banana cytosol 48.75 26.4
HORVU3Hr1G010650.1 Barley plastid 20.94 26.27
TraesCS3D01G055800.1 Wheat cytosol 17.5 26.05
HORVU4Hr1G089870.1 Barley cytosol 16.88 25.71
TraesCSU01G125100.1 Wheat cytosol, plasma membrane, vacuole 7.19 22.12
HORVU6Hr1G090180.2 Barley nucleus 41.56 21.8
Zm00001d028887_P001 Maize cytosol 39.69 21.13
Zm00001d028888_P001 Maize cytosol, extracellular 39.38 20.97
KXG39528 Sorghum cytosol 39.38 20.86
Zm00001d047639_P004 Maize extracellular 41.56 13.45
Protein Annotations
MapMan:25.4.3.1.1Gene3D:3.40.50.150GO:A0A078EZI0EnsemblPlants:CDY06526ProteinID:CDY06526ProteinID:CDY06526.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016740GO:GO:0030410GO:GO:0030418EnsemblPlantsGene:GSBRNA2T00122639001InterPro:IPR004298InterPro:Nicotian_synth
PFAM:PF03059PFscan:PS51142PANTHER:PTHR32266PANTHER:PTHR32266:SF12MetaCyc:PWY-5912MetaCyc:PWY-5957
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0004EF3BDB:::
Description
BnaC02g12500D
Coordinates
chrLK031971:+:109211..110173
Molecular Weight (calculated)
35751.3 Da
IEP (calculated)
6.104
GRAVY (calculated)
-0.034
Length
320 amino acids
Sequence
(BLAST)
001: MACENNLVVK QIIDLYTQIS NLESLKPSKN VDTLFGQLVS TCLPTDTDID VTKIHDEKVK DMRSHLIKLC GEAEGYLEQH FSTIIGSFED NPLNHLHIFP
101: YYNNYLKLSK LEFDLLAQHT SHVPTKIAFI GSGPMPLTSI VLAKFHLPNT TIHNFDIDSE ANTLASNLVS RDPDLSERMI FHTTDVLNAK EGLDQYDVVF
201: LAALVGMDKE SKVKAIEHLE KHMAPGAVLM LRSAHGLRAF LYPIVDSCDL KGFEVLTIYH PSDDVVNSVV IARKLGGLGE VRSSQIERCV VMPCNCSKIH
301: AIMNSRGIKK NMIEEFTAIE
Best Arabidopsis Sequence Match ( AT5G56080.1 )
(BLAST)
001: MACENNLVVK QIMDLYNQIS NLESLKPSKN VDTLFRQLVS TCLPTDTNID VTEIHDEKVK DMRSHLIKLC GEAEGYLEQH FSAILGSFED NPLNHLHIFP
101: YYNNYLKLGK LEFDLLSQHT THVPTKVAFI GSGPMPLTSI VLAKFHLPNT TFHNFDIDSH ANTLASNLVS RDSDLSKRMI FHTTDVLNAK EGLDQYDVVF
201: LAALVGMDKE SKVKAIEHLE KHMAPGAVVM LRSAHGLRAF LYPIVDSCDL KGFEVLTIYH PSDDVVNSVV IARKLGGSNG ARGSQIGRCV VMPCNCSKVH
301: AILNNRGMEK NLIEEYSAIE
Arabidopsis Description
NAS2NAS2 [Source:UniProtKB/TrEMBL;Acc:A0A178ULG9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.