Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 cytosol: 12913155
cytosol: 23455933
gfp PMID: 12913155 doi
D Mizuno, K Higuchi, T Sakamoto, H Nakanishi, S Mori, NK Nishizawa
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Science, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
gfp PMID: 23455933 doi
ML Zhou, LP Qi, JF Pang, Q Zhang, Z Lei, YX Tang, XM Zhu, JR Shao, YM Wu
School of Life and Basic Sciences, Sichuan Agricultural University, Yaan, Sichuan 625014, People's Republic of China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER93732 Sorghum cytosol 82.45 81.54
Zm00001d022557_P001 Maize cytosol 80.78 79.89
Zm00001d013655_P001 Maize cytosol 77.99 78.65
Zm00001d012829_P001 Maize cytosol 23.68 73.91
TraesCS2A01G095700.1 Wheat cytosol 67.97 71.76
TraesCS2D01G094200.1 Wheat cytosol 67.97 71.76
Os07t0689600-01 Rice cytosol 67.97 71.14
TraesCS2B01G111100.1 Wheat cytosol 67.13 70.88
HORVU2Hr1G015980.1 Barley cytosol 64.9 68.53
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 59.89 65.75
Zm00001d047658_P001 Maize cytosol 59.89 65.75
Zm00001d047656_P001 Maize cytosol 58.5 64.22
GSMUA_Achr2P00420_001 Banana cytosol 44.01 50.0
GSMUA_Achr5P21100_001 Banana cytosol 43.73 49.84
PGSC0003DMT400007275 Potato cytosol 37.6 42.59
Solyc01g100490.2.1 Tomato cytosol 37.33 42.27
AT1G56430.1 Thale cress cytosol 37.88 41.98
KRG96720 Soybean cytosol 36.77 41.9
KRH36982 Soybean cytosol 35.93 41.75
VIT_14s0060g01190.t01 Wine grape cytosol 37.33 41.49
CDY39002 Canola cytosol 36.77 40.99
KRH68436 Soybean cytosol 36.49 40.81
CDY42364 Canola cytosol 36.49 40.68
Bra038164.1-P Field mustard cytosol 36.49 40.56
CDX98807 Canola cytosol 33.43 40.4
AT1G09240.1 Thale cress cytosol 35.38 39.69
CDX93517 Canola cytosol 35.38 39.32
Bra018573.1-P Field mustard cytosol 35.38 39.32
CDX94325 Canola cytosol 30.36 39.21
CDX94991 Canola cytosol 35.1 39.01
CDY69948 Canola cytosol 30.08 38.85
Bra009407.1-P Field mustard cytosol 33.15 38.76
AT5G04950.1 Thale cress cytosol 34.54 38.75
AT5G56080.1 Thale cress cytosol 34.54 38.75
VIT_11s0052g01150.t01 Wine grape plastid 30.64 38.73
Bra005831.1-P Field mustard cytosol 34.26 38.44
CDY64985 Canola cytosol 33.98 38.12
CDY06526 Canola cytosol 33.98 38.12
Bra035602.1-P Field mustard cytosol 33.98 38.12
CDY11321 Canola cytosol 33.98 38.12
CDY28616 Canola cytosol 33.98 38.12
CDX80931 Canola cytosol 33.98 38.12
CDY17383 Canola cytosol 33.7 37.81
Bra002851.1-P Field mustard cytosol 33.7 37.81
CDY46596 Canola cytosol 21.45 37.02
KRH43850 Soybean cytosol 29.25 36.71
CDX70180 Canola cytosol 32.87 36.31
KRH13614 Soybean cytosol 28.69 36.01
AT4G26483.1 Thale cress cytosol, extracellular, plastid 8.36 35.71
Zm00001d028887_P001 Maize cytosol 59.33 35.44
Zm00001d028888_P001 Maize cytosol, extracellular 58.22 34.78
Bra004521.1-P Field mustard cytosol 14.76 28.65
GSMUA_Achr11P... Banana cytosol 45.13 27.41
Zm00001d047639_P004 Maize extracellular 59.89 21.74
CDY01124 Canola cytosol 7.52 21.43
CDY09316 Canola cytosol 5.29 18.45
Protein Annotations
EntrezGene:103643789MapMan:25.4.3.1.1Gene3D:3.40.50.150ProteinID:BAB91326.1GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410
GO:GO:0030418InterPro:IPR004298InterPro:Nicotian_synthProteinID:ONM07721.1PFAM:PF03059PFscan:PS51142
PANTHER:PTHR32266PANTHER:PTHR32266:SF10UniProt:Q8LT22InterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI000009D368
EnsemblPlantsGene:Zm00001d033496EnsemblPlants:Zm00001d033496_P001EnsemblPlants:Zm00001d033496_T001SEG:seg::
Description
nicotianamine synthase 3 nicotianamine synthase 3
Coordinates
chr1:-:264462071..264463236
Molecular Weight (calculated)
38797.6 Da
IEP (calculated)
5.659
GRAVY (calculated)
0.035
Length
359 amino acids
Sequence
(BLAST)
001: MAVMGKEEEE QQQQHKEEEV VQGDVRVVVQ QETAADEEAE SALVRKISGL AAAIARLPSL SPSPEVNALF TDLVTACIPR STVDVERLGP ELQRMRAGLI
101: RLCADAEALL EAHYSDLLAA FDNPLDHLPL FPYFTNYLLL SQLEHGLLAR HVPGPPPSRV AFVGSGPLPL SSLVLASRHL PAAAFDNYDI CGDANDRARR
201: LVRADAALAA RMAFRTSDVA HVTRELAAYD VVFLAALVGM AAEEKARVVE HLGRHMAPGA ALVVRSAHGA RGFLYPVVDP EEIRRGGFDV LAVHHPEGEV
301: INSVIIARKP LPVVDEHAVA GVGHAHAHGA VLSRPCLCCE MEARAHQKME EVAMEQLPS
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.