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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98807 Canola cytosol 83.69 91.58
Bra009407.1-P Field mustard cytosol 80.31 85.02
CDY11321 Canola cytosol 81.85 83.12
CDX80931 Canola cytosol 81.54 82.81
AT5G04950.1 Thale cress cytosol 81.54 82.81
CDY06526 Canola cytosol 77.54 78.75
CDY64985 Canola cytosol 76.0 77.19
CDY28616 Canola cytosol 75.69 76.88
CDY17383 Canola cytosol 74.46 75.62
CDX94325 Canola cytosol 56.92 66.55
CDY69948 Canola cytosol 56.62 66.19
CDX94991 Canola cytosol 60.92 61.3
CDX93517 Canola cytosol 57.54 57.89
KRG96720 Soybean cytosol 55.08 56.83
CDY42364 Canola cytosol 56.0 56.52
CDY09316 Canola cytosol 17.85 56.31
CDY39002 Canola cytosol 55.69 56.21
VIT_14s0060g01190.t01 Wine grape cytosol 55.69 56.04
KRH68436 Soybean cytosol 54.77 55.45
CDY46596 Canola cytosol 35.38 55.29
CDY01124 Canola cytosol 20.62 53.17
Solyc01g100490.2.1 Tomato cytosol 51.69 53.0
PGSC0003DMT400007275 Potato cytosol 51.38 52.68
KRH36982 Soybean cytosol 48.62 51.13
GSMUA_Achr2P00420_001 Banana cytosol 47.69 49.05
GSMUA_Achr5P21100_001 Banana cytosol 46.46 47.94
TraesCS2A01G033500.1 Wheat cytosol 36.31 42.14
HORVU6Hr1G032290.1 Barley cytosol 34.46 41.95
TraesCS2D01G033000.1 Wheat peroxisome 37.54 41.08
Zm00001d012829_P001 Maize cytosol 14.46 40.87
HORVU4Hr1G089750.2 Barley cytosol 24.92 40.3
TraesCS3B01G068400.1 Wheat cytosol 22.15 40.0
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 39.69 39.45
Zm00001d047658_P001 Maize cytosol 39.69 39.45
TraesCS2B01G047100.2 Wheat cytosol 37.54 39.23
TraesCS6A01G386200.1 Wheat cytosol 39.69 39.09
TraesCS3B01G068500.1 Wheat cytosol 21.54 38.89
Zm00001d047656_P001 Maize cytosol 39.08 38.84
TraesCS2A01G049900.1 Wheat cytosol 39.38 38.79
TraesCS2B01G060800.1 Wheat cytosol 39.38 38.79
TraesCS6D01G370800.1 Wheat cytosol 39.38 38.79
TraesCS6D01G382900.1 Wheat cytosol, plastid 39.08 38.72
HORVU4Hr1G053790.1 Barley cytosol 39.08 38.48
TraesCS2D01G049200.1 Wheat cytosol 39.08 38.48
TraesCS5A01G552000.1 Wheat cytosol 39.38 38.44
TraesCSU01G125500.1 Wheat cytosol 39.38 38.44
TraesCSU01G125200.1 Wheat cytosol 39.38 38.44
TraesCS5A01G552400.1 Wheat cytosol 39.38 38.44
TraesCS6A01G093000.1 Wheat cytosol 38.77 38.18
TraesCS6B01G425200.1 Wheat cytosol, peroxisome, plastid 38.46 37.88
TraesCS6B01G438900.1 Wheat cytosol, plastid 38.15 37.8
Os03t0307200-01 Rice endoplasmic reticulum 37.85 37.73
TraesCS4B01G183900.1 Wheat cytosol 38.15 37.58
Os07t0689600-01 Rice cytosol 39.38 37.32
TraesCS6A01G398700.1 Wheat cytosol, plastid 37.54 37.2
TraesCS6D01G148200.1 Wheat cytosol 36.92 36.47
TraesCS6A01G165100.1 Wheat cytosol 36.92 36.47
TraesCS2D01G094200.1 Wheat cytosol 38.15 36.47
HORVU0Hr1G017720.1 Barley cytosol, plastid 29.85 36.33
TraesCS6A01G163100.1 Wheat cytosol 36.31 36.2
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 39.08 36.18
HORVU2Hr1G015980.1 Barley cytosol 37.85 36.18
TraesCS6B01G186100.1 Wheat cytosol 36.62 36.17
TraesCS6B01G187400.1 Wheat cytosol 36.62 36.17
TraesCS6D01G148000.1 Wheat cytosol 36.62 36.17
TraesCS2B01G111100.1 Wheat cytosol 37.54 35.88
TraesCS2A01G095700.1 Wheat cytosol 37.54 35.88
TraesCS6A01G163200.1 Wheat cytosol 34.77 35.76
HORVU4Hr1G053770.1 Barley cytosol 36.0 35.45
TraesCS6D01G148600.1 Wheat cytosol 35.69 35.26
HORVU6Hr1G090040.1 Barley cytosol 38.15 34.54
Zm00001d013655_P001 Maize cytosol 36.92 33.71
TraesCS3A01G468300.1 Wheat plastid 34.77 33.24
TraesCS4D01G184900.1 Wheat plastid 39.08 33.07
Zm00001d033496_P001 Maize cytosol 36.31 32.87
EER93732 Sorghum cytosol 36.31 32.51
Zm00001d022557_P001 Maize cytosol 36.0 32.23
HORVU2Hr1G004960.1 Barley mitochondrion 36.31 29.43
TraesCS3D01G055800.1 Wheat cytosol 17.54 26.51
GSMUA_Achr11P... Banana cytosol 47.38 26.06
HORVU4Hr1G089870.1 Barley cytosol 16.0 24.76
HORVU3Hr1G010650.1 Barley plastid 19.38 24.71
TraesCSU01G125100.1 Wheat cytosol, plasma membrane, vacuole 7.69 24.04
Zm00001d028887_P001 Maize cytosol 39.38 21.3
Zm00001d028888_P001 Maize cytosol, extracellular 38.46 20.8
KXG39528 Sorghum cytosol 38.46 20.7
HORVU6Hr1G090180.2 Barley nucleus 38.46 20.49
Zm00001d047639_P004 Maize extracellular 40.31 13.25
Protein Annotations
MapMan:25.4.3.1.1Gene3D:3.40.50.150GO:A0A078BZM4EnsemblPlants:CDX70180ProteinID:CDX70180ProteinID:CDX70180.1
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016740GO:GO:0030410GO:GO:0030418EnsemblPlantsGene:GSBRNA2T00136300001InterPro:IPR004298InterPro:Nicotian_synth
PFAM:PF03059PFscan:PS51142PANTHER:PTHR32266PANTHER:PTHR32266:SF12MetaCyc:PWY-5912MetaCyc:PWY-5957
UniParc:UPI0004EF1BAA:::::
Description
BnaA10g25290D
Coordinates
chrLK031790:+:3438096..3439307
Molecular Weight (calculated)
36324.0 Da
IEP (calculated)
6.876
GRAVY (calculated)
-0.064
Length
325 amino acids
Sequence
(BLAST)
001: MACKNNRVVK QIIHLYDQIS KLESLKPSKN VDTLFGQLVS TCLPTDTNID VTKMSEEVKD MRSNLIKLCG EAEGYLEQHF STILGSLLQE DQNPLDHLNI
101: FPYYNNYLKL GKLEFNLLSQ HSSHVPSKIA FVGSGPMPLT SIVLAKFHLP NTTFHNFDID SHANALASSL VSRDPDLSKR MIFHTTDVLN ATEGLDQYDV
201: VFLAALVGMD KEAKVKAIEH LEKHMALGAV LMLRSAHALR AFLYPIVDSS DLKGFQLLTI FHPTDDVVNS SLYLKYPNLL ISTTTNGVNG TRGYMLMPCN
301: CSKVHAIMNN CCKKNKMIEE FSAIE
Best Arabidopsis Sequence Match ( AT5G04950.1 )
(BLAST)
001: MACQNNLVVK QIIDLYDQIS KLKSLKPSKN VDTLFGQLVS TCLPTDTNID VTNMCEEVKD MRANLIKLCG EAEGYLEQHF STILGSLQED QNPLDHLHIF
101: PYYSNYLKLG KLEFDLLSQH SSHVPTKIAF VGSGPMPLTS IVLAKFHLPN TTFHNFDIDS HANTLASNLV SRDPDLSKRM IFHTTDVLNA TEGLDQYDVV
201: FLAALVGMDK ESKVKAIEHL EKHMAPGAVL MLRSAHALRA FLYPIVDSSD LKGFQLLTIY HPTDDVVNSV VIARKLGGPT TPGVNGTRGC MFMPCNCSKI
301: HAIMNNRGKK NMIEEFSAIE
Arabidopsis Description
NAS1Nicotianamine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF79]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.