Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G033000.1 | Wheat | peroxisome | 92.5 | 87.21 |
| TraesCS2B01G047100.2 | Wheat | cytosol | 93.21 | 83.92 |
| HORVU2Hr1G004960.1 | Barley | mitochondrion | 92.14 | 64.34 |
| TraesCS6A01G093000.1 | Wheat | cytosol | 72.86 | 61.82 |
| TraesCS2A01G049900.1 | Wheat | cytosol | 72.5 | 61.52 |
| TraesCS5A01G552400.1 | Wheat | cytosol | 72.14 | 60.66 |
| TraesCS6A01G386200.1 | Wheat | cytosol | 71.07 | 60.3 |
| TraesCS6A01G163100.1 | Wheat | cytosol | 70.0 | 60.12 |
| TraesCS5A01G552000.1 | Wheat | cytosol | 71.07 | 59.76 |
| TraesCS6A01G165100.1 | Wheat | cytosol | 69.64 | 59.27 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 66.43 | 58.86 |
| TraesCS2A01G095700.1 | Wheat | cytosol | 63.21 | 52.06 |
| TraesCS6A01G398700.1 | Wheat | cytosol, plastid | 53.21 | 45.43 |
| TraesCS3A01G468300.1 | Wheat | plastid | 50.71 | 41.76 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 46.79 | 41.59 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 45.36 | 40.19 |
| CDX98807 | Canola | cytosol | 42.5 | 40.07 |
| Solyc01g100490.2.1 | Tomato | cytosol | 44.64 | 39.43 |
| PGSC0003DMT400007275 | Potato | cytosol | 44.64 | 39.43 |
| CDX94325 | Canola | cytosol | 38.21 | 38.49 |
| Bra009407.1-P | Field mustard | cytosol | 42.14 | 38.44 |
| KRG96720 | Soybean | cytosol | 42.86 | 38.1 |
| CDY39002 | Canola | cytosol | 43.21 | 37.58 |
| CDY42364 | Canola | cytosol | 43.21 | 37.58 |
| KRH36982 | Soybean | cytosol | 41.43 | 37.54 |
| AT5G04950.1 | Thale cress | cytosol | 42.86 | 37.5 |
| Bra038164.1-P | Field mustard | cytosol | 43.21 | 37.46 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 43.21 | 37.46 |
| CDY69948 | Canola | cytosol | 37.14 | 37.41 |
| Bra005831.1-P | Field mustard | cytosol | 42.5 | 37.19 |
| AT1G09240.1 | Thale cress | cytosol | 42.5 | 37.19 |
| AT5G56080.1 | Thale cress | cytosol | 42.5 | 37.19 |
| KRH68436 | Soybean | cytosol | 42.5 | 37.07 |
| CDY64985 | Canola | cytosol | 42.14 | 36.88 |
| Bra035602.1-P | Field mustard | cytosol | 42.14 | 36.88 |
| CDY06526 | Canola | cytosol | 42.14 | 36.88 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 37.14 | 36.62 |
| CDY11321 | Canola | cytosol | 41.79 | 36.56 |
| Bra018573.1-P | Field mustard | cytosol | 42.14 | 36.53 |
| CDX94991 | Canola | cytosol | 42.14 | 36.53 |
| CDX70180 | Canola | cytosol | 42.14 | 36.31 |
| CDY28616 | Canola | cytosol | 41.43 | 36.25 |
| CDX80931 | Canola | cytosol | 41.43 | 36.25 |
| CDX93517 | Canola | cytosol | 41.79 | 36.22 |
| AT1G56430.1 | Thale cress | cytosol | 41.79 | 36.11 |
| CDY17383 | Canola | cytosol | 41.07 | 35.94 |
| Bra002851.1-P | Field mustard | cytosol | 41.07 | 35.94 |
| KRH13614 | Soybean | cytosol | 34.64 | 33.92 |
| CDY46596 | Canola | cytosol | 25.0 | 33.65 |
| KRH43850 | Soybean | cytosol | 34.29 | 33.57 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 8.93 | 29.76 |
| Bra004521.1-P | Field mustard | cytosol | 18.93 | 28.65 |
| GSMUA_Achr11P... | Banana | cytosol | 47.5 | 22.5 |
| CDY01124 | Canola | cytosol | 9.64 | 21.43 |
| CDY09316 | Canola | cytosol | 7.14 | 19.42 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G033500.1 | EnsemblPlantsGene:TraesCS2A01G033500 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | InterPro:SAM-dependent_MTases | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 | PFAM:PF03059 |
| PFscan:PS51142 | SUPFAM:SSF53335 | MapMan:25.4.3.1.1 | : | : | : |
Description
No Description!
Coordinates
chr2A:-:14976881..14977723
Molecular Weight (calculated)
30080.0 Da
IEP (calculated)
4.985
GRAVY (calculated)
0.147
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAENSEVAA LVEKITGFHA AISKLPSLSP SPQVDALFTE LVAACVPSSP VDVTKLGPEA QEMRQDLIRL CSTAEGLLEA HYSDMLTALD SPLDHLGRFP
101: YFDNYINLSK LENDLLAGHM AAPARVAFIG SGPLPFSSLF LATYHLPDTR FDNYDRCSVA NGRAMKLVGA ADVDVRSRMP FHTAEVADLT SELGAYDVVF
201: LAALVGMTSE EKANTIAHLG KHMADGAVLV ARSAHGARAF LYPVVELDDI GRGGFQVLAV HHPAGDEVFN SFIVAQKVKI
101: YFDNYINLSK LENDLLAGHM AAPARVAFIG SGPLPFSSLF LATYHLPDTR FDNYDRCSVA NGRAMKLVGA ADVDVRSRMP FHTAEVADLT SELGAYDVVF
201: LAALVGMTSE EKANTIAHLG KHMADGAVLV ARSAHGARAF LYPVVELDDI GRGGFQVLAV HHPAGDEVFN SFIVAQKVKI
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.