Factsheet for PGSC0003DMT400007275

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g100490.2.1	Tomato	cytosol	95.58	95.58
VIT_14s0060g01190.t01	Wine grape	cytosol	66.56	65.33
KRG96720	Soybean	cytosol	62.78	63.17
KRH68436	Soybean	cytosol	63.72	62.93
CDX94991	Canola	cytosol	59.94	58.82
Bra018573.1-P	Field mustard	cytosol	59.94	58.82
AT1G09240.1	Thale cress	cytosol	59.31	58.75
AT1G56430.1	Thale cress	cytosol	59.94	58.64
Bra038164.1-P	Field mustard	cytosol	59.62	58.51
CDY39002	Canola	cytosol	58.68	57.76
CDX93517	Canola	cytosol	58.68	57.59
CDY42364	Canola	cytosol	58.04	57.14
KRH36982	Soybean	cytosol	55.52	56.96
CDX94325	Canola	cytosol	48.9	55.76
CDY06526	Canola	cytosol	56.15	55.62
Bra035602.1-P	Field mustard	cytosol	55.84	55.31
CDY64985	Canola	cytosol	55.84	55.31
Bra002851.1-P	Field mustard	cytosol	55.2	54.69
CDX98807	Canola	cytosol	51.1	54.55
AT5G56080.1	Thale cress	cytosol	54.89	54.38
CDY17383	Canola	cytosol	54.89	54.38
CDY28616	Canola	cytosol	54.89	54.38
CDY69948	Canola	cytosol	47.63	54.32
GSMUA_Achr5P21100_001	Banana	cytosol	53.31	53.65
Bra005831.1-P	Field mustard	cytosol	53.94	53.44
Bra009407.1-P	Field mustard	cytosol	51.73	53.42
GSMUA_Achr2P00420_001	Banana	cytosol	52.68	52.85
AT5G04950.1	Thale cress	cytosol	53.31	52.81
CDX80931	Canola	cytosol	53.31	52.81
CDY11321	Canola	cytosol	52.68	52.19
CDX70180	Canola	cytosol	52.68	51.38
HORVU4Hr1G089750.2	Barley	cytosol	29.34	46.27
HORVU6Hr1G032290.1	Barley	cytosol	38.8	46.07
TraesCS3B01G068400.1	Wheat	cytosol	25.87	45.56
Zm00001d012829_P001	Maize	cytosol	16.4	45.22
CDY46596	Canola	cytosol	29.34	44.71
TraesCS2A01G033500.1	Wheat	cytosol	39.43	44.64
AT4G26483.1	Thale cress	cytosol, extracellular, plastid	11.67	44.05
TraesCS3B01G068500.1	Wheat	cytosol	24.92	43.89
TraesCS2D01G033000.1	Wheat	peroxisome	40.69	43.43
Os07t0689600-01	Rice	cytosol	45.43	41.98
Zm00001d047658_P001	Maize	cytosol	43.22	41.9
Zm00001d047651_P001	Maize	cytosol, endoplasmic reticulum, extracellular	43.22	41.9
TraesCS2A01G095700.1	Wheat	cytosol	44.8	41.76
TraesCS2B01G047100.2	Wheat	cytosol	40.69	41.48
TraesCS2D01G094200.1	Wheat	cytosol	44.48	41.47
TraesCS2B01G111100.1	Wheat	cytosol	44.48	41.47
TraesCS6D01G370800.1	Wheat	cytosol	42.9	41.21
TraesCS6A01G386200.1	Wheat	cytosol	42.9	41.21
TraesCS5A01G552000.1	Wheat	cytosol	43.22	41.14
TraesCSU01G125500.1	Wheat	cytosol	43.22	41.14
TraesCSU01G125200.1	Wheat	cytosol	43.22	41.14
Zm00001d047656_P001	Maize	cytosol	42.27	40.98
TraesCS6B01G425200.1	Wheat	cytosol, peroxisome, plastid	42.59	40.91
TraesCS2D01G049200.1	Wheat	cytosol	42.59	40.91
TraesCS2B01G060800.1	Wheat	cytosol	42.59	40.91
TraesCS5A01G552400.1	Wheat	cytosol	42.9	40.84
Os03t0307200-01	Rice	endoplasmic reticulum	41.96	40.8
TraesCS6A01G093000.1	Wheat	cytosol	42.27	40.61
HORVU4Hr1G053790.1	Barley	cytosol	42.27	40.61
HORVU2Hr1G015980.1	Barley	cytosol	43.53	40.59
Bra004521.1-P	Field mustard	cytosol	23.66	40.54
TraesCS2A01G049900.1	Wheat	cytosol	41.96	40.3
TraesCS4B01G183900.1	Wheat	cytosol	41.96	40.3
TraesCS6A01G163100.1	Wheat	cytosol	41.32	40.18
TraesCS6D01G148600.1	Wheat	cytosol	41.32	39.82
TraesCS6D01G148200.1	Wheat	cytosol	41.32	39.82
TraesCS6D01G148000.1	Wheat	cytosol	41.32	39.82
TraesCS6B01G186100.1	Wheat	cytosol	41.32	39.82
TraesCS6A01G165100.1	Wheat	cytosol	41.32	39.82
CDY09316	Canola	cytosol	12.93	39.81
TraesCS6B01G187400.1	Wheat	cytosol	41.01	39.51
TraesCS6A01G163200.1	Wheat	cytosol	38.8	38.92
CDY01124	Canola	cytosol	15.46	38.89
TraesCS6D01G382900.1	Wheat	cytosol, plastid	39.75	38.41
HORVU4Hr1G053850.2	Barley	cytosol, plasma membrane	42.27	38.18
EER93732	Sorghum	cytosol	43.53	38.02
HORVU6Hr1G090040.1	Barley	cytosol	42.9	37.88
HORVU4Hr1G053770.1	Barley	cytosol	39.43	37.88
Zm00001d033496_P001	Maize	cytosol	42.59	37.6
TraesCS6B01G438900.1	Wheat	cytosol, plastid	38.8	37.5
Zm00001d022557_P001	Maize	cytosol	42.9	37.47
TraesCS6A01G398700.1	Wheat	cytosol, plastid	38.49	37.2
Zm00001d013655_P001	Maize	cytosol	41.32	36.8
TraesCS4D01G184900.1	Wheat	plastid	42.59	35.16
HORVU0Hr1G017720.1	Barley	cytosol, plastid	29.34	34.83
TraesCS3A01G468300.1	Wheat	plastid	37.22	34.71
HORVU2Hr1G004960.1	Barley	mitochondrion	38.8	30.67
GSMUA_Achr11P...	Banana	cytosol	51.1	27.41
HORVU3Hr1G010650.1	Barley	plastid	21.45	26.67
HORVU4Hr1G089870.1	Barley	cytosol	15.77	23.81
TraesCS3D01G055800.1	Wheat	cytosol	16.09	23.72
KXG39528	Sorghum	cytosol	43.53	22.85
Zm00001d028888_P001	Maize	cytosol, extracellular	42.9	22.63
Zm00001d028887_P001	Maize	cytosol	42.59	22.46
HORVU6Hr1G090180.2	Barley	nucleus	42.9	22.3
TraesCSU01G125100.1	Wheat	cytosol, plasma membrane, vacuole	6.94	21.15
Zm00001d047639_P004	Maize	extracellular	42.9	13.75

Protein Annotations

EntrezGene:102578513	MapMan:25.4.3.1.1	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030410	GO:GO:0030418
InterPro:IPR004298	UniProt:M0ZSQ6	InterPro:Nicotian_synth	PFAM:PF03059	EnsemblPlantsGene:PGSC0003DMG400002800	PGSC:PGSC0003DMG400002800
EnsemblPlants:PGSC0003DMT400007275	PFscan:PS51142	PANTHER:PTHR32266	PANTHER:PTHR32266:SF12	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI000295DE1B	RefSeq:XP_006344762.1	:	:	:	:

Description

Nicotianamine synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400002800]

Coordinates

chr1:+:78160415..78161716

Molecular Weight (calculated)

35256.0 Da

IEP (calculated)

6.224

GRAVY (calculated)

0.123

Length

317 amino acids

Sequence
(BLAST)

001: MVCPNSNPLV EKVCELYVQI SRLENLSPSK DVNILFTDLV HTCMPPNPID VSKLCQKIQQ IRSHLIKLCG QAEGLLESHF SKILGSYENP LQHLHIFPYF
101: DNYIKLSLLE YNILTKNTTN IPKKIAFIGS GPLPLTSLVL ATKHLTTTYF HNYDIDVDAN SMAAALVAAD PDLSSRMTFH TADIMDVTCA LKDYDVVFLA
201: ALVGMDKEDK VKVVDHLAKY MSPGATLMLR SAHGARAFLY PVLDPRDLRG FEVLSVYHPT DEVINSVIIA RKLPVPCVQP LDGLGAYVLP SKCACAEIHA
301: FNPLNKMNLV EEFALEE

Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)

001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS

Arabidopsis Description

NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.