Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:mitochondrion
YLoc:plasma membrane
 extracellular: 20408568
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d047658_P001 Maize cytosol 31.04 93.88
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 31.04 93.88
Zm00001d047656_P001 Maize cytosol 30.54 92.35
Zm00001d028887_P001 Maize cytosol 51.67 85.03
Zm00001d028888_P001 Maize cytosol, extracellular 51.37 84.53
TraesCS6A01G093000.1 Wheat cytosol 25.08 75.15
TraesCS2D01G049200.1 Wheat cytosol 24.77 74.24
Os03t0307200-01 Rice endoplasmic reticulum 24.37 73.93
TraesCS6B01G425200.1 Wheat cytosol, peroxisome, plastid 24.57 73.64
TraesCS2A01G049900.1 Wheat cytosol 24.57 73.64
TraesCS2B01G060800.1 Wheat cytosol 24.47 73.33
TraesCS6D01G370800.1 Wheat cytosol 24.47 73.33
TraesCS6A01G386200.1 Wheat cytosol 24.47 73.33
TraesCS4B01G183900.1 Wheat cytosol 24.37 73.03
HORVU4Hr1G053790.1 Barley cytosol 24.37 73.03
TraesCS6A01G163100.1 Wheat cytosol 24.06 73.01
TraesCSU01G125200.1 Wheat cytosol 24.57 72.97
TraesCSU01G125500.1 Wheat cytosol 24.57 72.97
TraesCS6D01G148000.1 Wheat cytosol 24.27 72.95
TraesCS5A01G552000.1 Wheat cytosol 24.47 72.67
TraesCS6B01G187400.1 Wheat cytosol 24.17 72.64
TraesCS6D01G148200.1 Wheat cytosol 24.17 72.64
TraesCS5A01G552400.1 Wheat cytosol 24.37 72.37
TraesCS6A01G165100.1 Wheat cytosol 24.06 72.34
TraesCS6B01G186100.1 Wheat cytosol 24.06 72.34
HORVU6Hr1G032290.1 Barley cytosol 19.51 72.28
TraesCS6A01G163200.1 Wheat cytosol 23.05 72.15
TraesCS6D01G148600.1 Wheat cytosol 23.66 71.12
HORVU4Hr1G053850.2 Barley cytosol, plasma membrane 24.57 69.23
TraesCS3B01G068400.1 Wheat cytosol 12.54 68.89
HORVU4Hr1G089750.2 Barley cytosol 13.95 68.66
HORVU6Hr1G090040.1 Barley cytosol 24.87 68.52
TraesCS3B01G068500.1 Wheat cytosol 12.44 68.33
HORVU4Hr1G053770.1 Barley cytosol 22.75 68.18
TraesCS4D01G184900.1 Wheat plastid 25.58 65.89
Zm00001d012829_P001 Maize cytosol 7.28 62.61
Zm00001d033496_P001 Maize cytosol 21.74 59.89
Zm00001d013655_P001 Maize cytosol 21.44 59.55
Zm00001d022557_P001 Maize cytosol 21.64 58.95
GSMUA_Achr5P21100_001 Banana cytosol 15.07 47.3
GSMUA_Achr11P... Banana cytosol 28.11 47.04
GSMUA_Achr2P00420_001 Banana cytosol 14.96 46.84
CDX98807 Canola cytosol 13.04 43.43
CDX94325 Canola cytosol 12.13 43.17
AT5G04950.1 Thale cress cytosol 13.95 43.12
PGSC0003DMT400007275 Potato cytosol 13.75 42.9
Solyc01g100490.2.1 Tomato cytosol 13.75 42.9
Bra005831.1-P Field mustard cytosol 13.85 42.81
HORVU6Hr1G090180.2 Barley nucleus 26.29 42.62
Bra018573.1-P Field mustard cytosol 13.85 42.41
AT5G56080.1 Thale cress cytosol 13.65 42.19
CDX94991 Canola cytosol 13.75 42.11
CDY11321 Canola cytosol 13.55 41.88
Bra038164.1-P Field mustard cytosol 13.65 41.8
VIT_14s0060g01190.t01 Wine grape cytosol 13.65 41.8
CDX93517 Canola cytosol 13.65 41.8
CDY69948 Canola cytosol 11.73 41.73
Bra009407.1-P Field mustard cytosol 12.94 41.69
KRG96720 Soybean cytosol 13.25 41.59
CDY64985 Canola cytosol 13.45 41.56
CDY17383 Canola cytosol 13.45 41.56
CDY06526 Canola cytosol 13.45 41.56
CDX80931 Canola cytosol 13.45 41.56
Bra035602.1-P Field mustard cytosol 13.45 41.56
AT1G56430.1 Thale cress cytosol 13.55 41.36
CDY39002 Canola cytosol 13.45 41.3
CDY42364 Canola cytosol 13.45 41.3
AT1G09240.1 Thale cress cytosol 13.35 41.25
Bra002851.1-P Field mustard cytosol 13.35 41.25
CDY28616 Canola cytosol 13.35 41.25
KRH68436 Soybean cytosol 13.25 40.81
CDX70180 Canola cytosol 13.25 40.31
KRH36982 Soybean cytosol 12.44 39.81
CDY46596 Canola cytosol 8.19 38.94
VIT_11s0052g01150.t01 Wine grape plastid 10.72 37.32
HORVU3Hr1G010650.1 Barley plastid 9.5 36.86
KRH43850 Soybean cytosol 10.62 36.71
AT4G26483.1 Thale cress cytosol, extracellular, plastid 3.03 35.71
KRH13614 Soybean cytosol 10.31 35.66
Bra004521.1-P Field mustard cytosol 5.76 30.81
CDY01124 Canola cytosol 2.83 22.22
CDY09316 Canola cytosol 2.12 20.39
Protein Annotations
MapMan:25.4.3.1.1Gene3D:3.40.50.150UniProt:A0A1D6PC27ProteinID:AQL07182.1GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410
GO:GO:0030418InterPro:IPR004298InterPro:Nicotian_synthPFAM:PF03059PFscan:PS51142PANTHER:PTHR32266
PANTHER:PTHR32266:SF10InterPro:SAM-dependent_MTasesSUPFAM:SSF53335SignalP:SignalP-noTMUniParc:UPI000843CB36EnsemblPlantsGene:Zm00001d047639
EnsemblPlants:Zm00001d047639_P004EnsemblPlants:Zm00001d047639_T004SEG:seg:::
Description
nicotianamine synthase6 nicotianamine synthase6
Coordinates
chr9:-:137824328..137836593
Molecular Weight (calculated)
106755.0 Da
IEP (calculated)
7.878
GRAVY (calculated)
0.003
Length
989 amino acids
Sequence
(BLAST)
001: MLDMQKRRVR LLLFITGILA LSMTAEKSRE LVGKEAASKS GQSTFMNCFD KGSGSLACTS KEGVKLYVNN IRSAHLEMVR QRAMGKALAD AVAEGLTPSE
101: AAKQAQKVSA KATKIAARQA NRILGPIISC GWDFFEAMYS GGSMMEGFLR GTGTLFGTYV GGFHGEERFG KLGYLAGSHV GSWGGGRIGL MIYDVISGLK
201: YMFMSVQPNN SFPTATVAAT TSMEAQNVEV AALVQKIAAL HAAIAKLPSL SPSPDVNALF TSLVMACVPP SPVDVTKLSP DGQRMREELI RLCSDAEGHL
301: EAHYADMLAA FDNPLDHLGR FPYFSNYIDL SKLEFDLLVR YILGLAPSRV AFVGSGPLPF SSLVLAARHL PNTLFDNYDR CGAANDRARK LVRADKDLNA
401: RMSFHTVDVA NMTDELDKYD VVFLAALVGM AAEDKAKVVA HLGRHMTDGA ALVVRSAHGA RAFLYPIVDP EDIRRGGFDV LAVYHPDNEV VNSVIIALEK
501: SRELVGKEAA SKSGQSTFMN CFDKGSSRLA STSKEGVKLY VNNIRSAHLE MVRQRTMGKA LADDVAEGLT SEATKQAHKV CAKATNIAAP QANRILGPII
601: SCGWDFFEAM YSGGSMMGGF LRGTGALFGT YVGGFLARSS YHQLRLAHSN SFPTATVATT TSMEAQNGEV AALVQKIAGL HAAIAKLPSL SPSPDVNALF
701: TSLVMACVPP SPVDVTKLSP DGQRMREELI RLCSDAEGHL EAHYADMLAA FDNPLDHLGR FPYFSNYIDL SKLEFDLLVR YIPGLAPSRV AFVGSGPLPF
801: SSLVLAARHL PNTLFDNYDR CGAANDRARK LVHADKDLNA RMSFHTVDVA NMTDELGKYD VVFLAALVGM AAEDKAKVVA HLGRHMADGA ALVVRSAHGA
901: RAFLYPIVDP EDIRRGGFDV LAVYHPDNEV VNSVIIARKM DAHAKGLQNG HAHARGTVPI VSPPCKCCKM EANTLQKREE MATMTELSI
Best Arabidopsis Sequence Match ( AT1G56423.2 )
(BLAST)
001: MDFRSRRVQF LLFAIGLIAL SMTAEKCREL VGQEAASKSG QFTFLNCFDM SSGTLACAVK EGVKLYFYNI RSIHVEKARN VAIEKALHEA LDNGMLAKEA
101: AKEGQRAGEK AAKLATRQAK RIIGPIVAAG WDFFEALYFG GTLTEGFLRG TGTMVGAYSG GYVGEQRFGR FGYLVGSTLG NWVGARVGLM VYDVVNGVNF
201: FYETYQSGEI YEDQSTNESP EDRSTYESRE DPSTYESPEE DQSTYETSNY EL
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; /.../ - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G56423]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.