Factsheet for VIT_11s0052g01150.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13614	Soybean	cytosol	69.72	69.23
KRH43850	Soybean	cytosol	69.37	68.88
VIT_14s0060g01190.t01	Wine grape	cytosol	50.35	44.27
GSMUA_Achr2P00420_001	Banana	cytosol	47.54	42.72
GSMUA_Achr5P21100_001	Banana	cytosol	46.83	42.22
HORVU6Hr1G032290.1	Barley	cytosol	35.92	38.2
Zm00001d012829_P001	Maize	cytosol	15.14	37.39
TraesCS2A01G033500.1	Wheat	cytosol	36.62	37.14
TraesCS2D01G033000.1	Wheat	peroxisome	38.38	36.7
TraesCS2B01G047100.2	Wheat	cytosol	37.32	34.08
TraesCS6A01G398700.1	Wheat	cytosol, plastid	39.08	33.84
TraesCS6B01G438900.1	Wheat	cytosol, plastid	39.08	33.84
HORVU0Hr1G017720.1	Barley	cytosol, plastid	31.69	33.71
TraesCS6D01G382900.1	Wheat	cytosol, plastid	38.73	33.54
Os03t0307200-01	Rice	endoplasmic reticulum	38.03	33.13
TraesCS6A01G163100.1	Wheat	cytosol	37.68	32.82
TraesCS6D01G148000.1	Wheat	cytosol	37.68	32.52
TraesCS6B01G187400.1	Wheat	cytosol	37.68	32.52
TraesCS6A01G165100.1	Wheat	cytosol	37.68	32.52
TraesCS6D01G148200.1	Wheat	cytosol	37.68	32.52
TraesCS6D01G148600.1	Wheat	cytosol	37.68	32.52
HORVU2Hr1G015980.1	Barley	cytosol	38.73	32.35
TraesCS2A01G095700.1	Wheat	cytosol	38.73	32.35
TraesCS2D01G094200.1	Wheat	cytosol	38.73	32.35
TraesCS2B01G111100.1	Wheat	cytosol	38.73	32.35
TraesCS6B01G186100.1	Wheat	cytosol	37.32	32.22
Zm00001d047651_P001	Maize	cytosol, endoplasmic reticulum, extracellular	36.97	32.11
Zm00001d047658_P001	Maize	cytosol	36.97	32.11
TraesCS6A01G163200.1	Wheat	cytosol	35.56	31.96
HORVU4Hr1G089750.2	Barley	cytosol	22.54	31.84
TraesCS6A01G386200.1	Wheat	cytosol	36.62	31.52
TraesCS6D01G370800.1	Wheat	cytosol	36.27	31.21
Os07t0689600-01	Rice	cytosol	37.68	31.2
Zm00001d047656_P001	Maize	cytosol	35.92	31.19
TraesCS3B01G068500.1	Wheat	cytosol	19.72	31.11
TraesCS6B01G425200.1	Wheat	cytosol, peroxisome, plastid	35.92	30.91
TraesCS4B01G183900.1	Wheat	cytosol	35.92	30.91
Zm00001d033496_P001	Maize	cytosol	38.73	30.64
TraesCSU01G125200.1	Wheat	cytosol	35.92	30.63
TraesCSU01G125500.1	Wheat	cytosol	35.92	30.63
TraesCS2D01G049200.1	Wheat	cytosol	35.56	30.61
TraesCS6A01G093000.1	Wheat	cytosol	35.56	30.61
TraesCS2B01G060800.1	Wheat	cytosol	35.56	30.61
TraesCS3B01G068400.1	Wheat	cytosol	19.37	30.56
Zm00001d013655_P001	Maize	cytosol	38.03	30.34
TraesCS2A01G049900.1	Wheat	cytosol	35.21	30.3
HORVU4Hr1G053790.1	Barley	cytosol	35.21	30.3
TraesCS5A01G552400.1	Wheat	cytosol	35.21	30.03
TraesCS5A01G552000.1	Wheat	cytosol	35.21	30.03
EER93732	Sorghum	cytosol	38.38	30.03
Zm00001d022557_P001	Maize	cytosol	38.03	29.75
TraesCS3A01G468300.1	Wheat	plastid	34.86	29.12
HORVU4Hr1G053850.2	Barley	cytosol, plasma membrane	35.21	28.49
HORVU6Hr1G090040.1	Barley	cytosol	35.92	28.41
HORVU4Hr1G053770.1	Barley	cytosol	32.04	27.58
HORVU2Hr1G004960.1	Barley	mitochondrion	38.38	27.18
TraesCS4D01G184900.1	Wheat	plastid	35.56	26.3
HORVU3Hr1G010650.1	Barley	plastid	20.07	22.35
GSMUA_Achr11P...	Banana	cytosol	46.48	22.34
HORVU4Hr1G089870.1	Barley	cytosol	15.85	21.43
TraesCSU01G125100.1	Wheat	cytosol, plasma membrane, vacuole	7.75	21.15
TraesCS3D01G055800.1	Wheat	cytosol	14.08	18.6
KXG39528	Sorghum	cytosol	37.68	17.72
Zm00001d028887_P001	Maize	cytosol	36.62	17.3
Zm00001d028888_P001	Maize	cytosol, extracellular	36.27	17.14
HORVU6Hr1G090180.2	Barley	nucleus	36.27	16.89
Zm00001d047639_P004	Maize	extracellular	37.32	10.72

Protein Annotations

EntrezGene:100244492	wikigene:100244492	MapMan:25.4.3.1.1	Gene3D:3.40.50.150	UniProt:A5BHX9	EMBL:AM460059
ProteinID:CAN70188	ProteinID:CAN70188.1	ProteinID:CCB44636	ProteinID:CCB44636.1	EMBL:FN594964	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0030410	GO:GO:0030418	InterPro:IPR004298	EntrezGene:LOC100244492	wikigene:LOC100244492	InterPro:Nicotian_synth
PFAM:PF03059	PFscan:PS51142	PANTHER:PTHR32266	PANTHER:PTHR32266:SF11	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI0001521011	ArrayExpress:VIT_11s0052g01150	EnsemblPlantsGene:VIT_11s0052g01150	EnsemblPlants:VIT_11s0052g01150.t01	unigene:Vvi.24157	RefSeq:XP_002270091
RefSeq:XP_002270091.1	RefSeq:XP_003633197	RefSeq:XP_003633197.1	:	:	:

Description

No Description!

Coordinates

chr11:+:18933586..18934510

Molecular Weight (calculated)

31737.8 Da

IEP (calculated)

7.100

GRAVY (calculated)

0.059

Length

284 amino acids

Sequence
(BLAST)

001: MASLQQSSLK TNVSTELLIA RIVQIHANIC KLESLRPSKQ VNSLFTHLVK LCTPPSSIDI TALPEEIQLI RQSLITLCGR AEGLLELEFS TFLTNVPQAL
101: NNLNLFPYYG NYVKLANLEY RILSDNGVVQ PKKVAFIGSG PLPLTTLIMA THHMKSTCFD NFDMDESANA VARQLVASDA ELQRRVKFET RDIMEVRDKL
201: GEYDCIFLAA LVGMSKEEKV KILGHVRKYM KEGGTLLVRS AKGARAFLYP VVEEEDLLGF EVLTIFHPTN EVINSVVLAR KPID

Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)

001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS

Arabidopsis Description

NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.