Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G186100.1 | Wheat | cytosol | 97.26 | 97.26 |
| TraesCS6D01G148000.1 | Wheat | cytosol | 96.96 | 96.96 |
| TraesCS6D01G148200.1 | Wheat | cytosol | 96.05 | 96.05 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 90.88 | 94.62 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 75.38 | 92.88 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 73.86 | 74.54 |
| TraesCS6D01G370800.1 | Wheat | cytosol | 73.56 | 73.33 |
| TraesCS2D01G049200.1 | Wheat | cytosol | 73.56 | 73.33 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 70.21 | 70.64 |
| Zm00001d047658_P001 | Maize | cytosol | 70.21 | 70.64 |
| Zm00001d047656_P001 | Maize | cytosol | 69.0 | 69.42 |
| TraesCS2D01G033000.1 | Wheat | peroxisome | 61.09 | 67.68 |
| TraesCS4D01G184900.1 | Wheat | plastid | 76.29 | 65.36 |
| TraesCS2D01G094200.1 | Wheat | cytosol | 61.09 | 59.12 |
| TraesCS3D01G055800.1 | Wheat | cytosol | 34.65 | 53.02 |
| TraesCS6D01G382900.1 | Wheat | cytosol, plastid | 48.63 | 48.78 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 44.68 | 46.52 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 43.47 | 45.4 |
| PGSC0003DMT400007275 | Potato | cytosol | 39.82 | 41.32 |
| KRG96720 | Soybean | cytosol | 39.51 | 41.27 |
| Solyc01g100490.2.1 | Tomato | cytosol | 39.51 | 41.01 |
| KRH36982 | Soybean | cytosol | 37.69 | 40.13 |
| KXG39528 | Sorghum | cytosol | 73.56 | 40.07 |
| KRH68436 | Soybean | cytosol | 38.91 | 39.88 |
| Bra038164.1-P | Field mustard | cytosol | 38.91 | 39.63 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 38.91 | 39.63 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 10.03 | 39.29 |
| AT1G09240.1 | Thale cress | cytosol | 37.99 | 39.06 |
| Bra018573.1-P | Field mustard | cytosol | 38.3 | 39.01 |
| CDX94991 | Canola | cytosol | 38.3 | 39.01 |
| CDX94325 | Canola | cytosol | 32.83 | 38.85 |
| CDY39002 | Canola | cytosol | 37.99 | 38.82 |
| CDY42364 | Canola | cytosol | 37.99 | 38.82 |
| CDX93517 | Canola | cytosol | 37.99 | 38.7 |
| AT1G56430.1 | Thale cress | cytosol | 37.99 | 38.58 |
| CDY64985 | Canola | cytosol | 37.39 | 38.44 |
| Bra035602.1-P | Field mustard | cytosol | 37.39 | 38.44 |
| CDX98807 | Canola | cytosol | 34.65 | 38.38 |
| CDY69948 | Canola | cytosol | 32.22 | 38.13 |
| CDY28616 | Canola | cytosol | 37.08 | 38.12 |
| CDY17383 | Canola | cytosol | 37.08 | 38.12 |
| CDY06526 | Canola | cytosol | 37.08 | 38.12 |
| AT5G56080.1 | Thale cress | cytosol | 37.08 | 38.12 |
| AT5G04950.1 | Thale cress | cytosol | 36.78 | 37.81 |
| Bra002851.1-P | Field mustard | cytosol | 36.78 | 37.81 |
| Zm00001d028887_P001 | Maize | cytosol | 69.0 | 37.77 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 32.52 | 37.68 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 68.69 | 37.6 |
| Bra005831.1-P | Field mustard | cytosol | 36.17 | 37.19 |
| Bra009407.1-P | Field mustard | cytosol | 34.35 | 36.81 |
| KRH43850 | Soybean | cytosol | 31.91 | 36.71 |
| CDY11321 | Canola | cytosol | 35.56 | 36.56 |
| CDX80931 | Canola | cytosol | 35.26 | 36.25 |
| CDY46596 | Canola | cytosol | 22.8 | 36.06 |
| KRH13614 | Soybean | cytosol | 31.31 | 36.01 |
| CDX70180 | Canola | cytosol | 35.26 | 35.69 |
| Bra004521.1-P | Field mustard | cytosol | 15.5 | 27.57 |
| GSMUA_Achr11P... | Banana | cytosol | 43.16 | 24.03 |
| Zm00001d047639_P004 | Maize | extracellular | 71.12 | 23.66 |
| CDY01124 | Canola | cytosol | 8.81 | 23.02 |
| CDY09316 | Canola | cytosol | 6.38 | 20.39 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G148600.1 | EnsemblPlantsGene:TraesCS6D01G148600 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | InterPro:SAM-dependent_MTases | ncoils:Coil | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 |
| PFAM:PF03059 | PFscan:PS51142 | SUPFAM:SSF53335 | MapMan:25.4.3.1.1 | : | : |
Description
No Description!
Coordinates
chr6D:-:121579471..121580460
Molecular Weight (calculated)
35273.2 Da
IEP (calculated)
5.521
GRAVY (calculated)
0.072
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAQNKEVAA LIEKIAGLQS AIAELPSLSP SPEVDRLFTD LVTACVPPSP VDVTKLSPEH QRMREALIRL CSAAEGKLEA HYADLLATFD NPLDHLARFP
101: YYSNYVNLSR LEYELLARHV PGIAPARVAF IGSGPLPFSS FVLAAHHLPD AHFDNYDLCG AANERARKLF GASEDGVGAR MKFHTADVAD LSQELGAYDV
201: VFLAALVGMV AEEKAKVIAH LGAHMVEGAS LVVRSAHGAR GFLYPIVDPE DIRRGGFEVL AVHHPEGEVI NSVIVARKVV DAQLSGPLNG DAHARGAVPL
301: VSPPCSFSTK MEAGALEKSD ELATKELAF
101: YYSNYVNLSR LEYELLARHV PGIAPARVAF IGSGPLPFSS FVLAAHHLPD AHFDNYDLCG AANERARKLF GASEDGVGAR MKFHTADVAD LSQELGAYDV
201: VFLAALVGMV AEEKAKVIAH LGAHMVEGAS LVVRSAHGAR GFLYPIVDPE DIRRGGFEVL AVHHPEGEVI NSVIVARKVV DAQLSGPLNG DAHARGAVPL
301: VSPPCSFSTK MEAGALEKSD ELATKELAF
1: MDPGALLMLR SARGLRSFLY VDVDPCDLKG FEVLEIYHPS MSDGFVNSVM VARKLTDRLI KYEWSRLEPY LWNKADDDFP NEAL
Arabidopsis Description
Nicotianamine synthase [Source:UniProtKB/TrEMBL;Acc:F4JUZ6]
SUBAcon: [plastid,extracellular,cytosol]
SUBAcon: [plastid,extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.