Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G089870.1 | Barley | cytosol | 49.77 | 50.95 |
| TraesCSU01G125100.1 | Wheat | cytosol, plasma membrane, vacuole | 20.93 | 43.27 |
| TraesCS2D01G049200.1 | Wheat | cytosol | 59.53 | 38.79 |
| TraesCS2D01G033000.1 | Wheat | peroxisome | 52.09 | 37.71 |
| TraesCS6D01G370800.1 | Wheat | cytosol | 57.67 | 37.58 |
| TraesCS6D01G148000.1 | Wheat | cytosol | 53.95 | 35.26 |
| TraesCS6D01G148200.1 | Wheat | cytosol | 53.95 | 35.26 |
| TraesCS6D01G148600.1 | Wheat | cytosol | 53.02 | 34.65 |
| TraesCS4D01G184900.1 | Wheat | plastid | 60.0 | 33.59 |
| TraesCS2D01G094200.1 | Wheat | cytosol | 43.26 | 27.35 |
| CDY01124 | Canola | cytosol | 13.02 | 22.22 |
| CDY09316 | Canola | cytosol | 10.23 | 21.36 |
| TraesCS6D01G382900.1 | Wheat | cytosol, plastid | 31.63 | 20.73 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 29.77 | 20.32 |
| CDX98807 | Canola | cytosol | 26.98 | 19.53 |
| AT5G04950.1 | Thale cress | cytosol | 27.91 | 18.75 |
| Bra009407.1-P | Field mustard | cytosol | 26.05 | 18.24 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 26.51 | 18.04 |
| Bra005831.1-P | Field mustard | cytosol | 26.51 | 17.81 |
| CDX80931 | Canola | cytosol | 26.51 | 17.81 |
| CDX70180 | Canola | cytosol | 26.51 | 17.54 |
| CDY11321 | Canola | cytosol | 26.05 | 17.5 |
| AT5G56080.1 | Thale cress | cytosol | 26.05 | 17.5 |
| CDY06526 | Canola | cytosol | 26.05 | 17.5 |
| Bra004521.1-P | Field mustard | cytosol | 14.88 | 17.3 |
| CDX94325 | Canola | cytosol | 22.33 | 17.27 |
| Bra035602.1-P | Field mustard | cytosol | 25.58 | 17.19 |
| CDY64985 | Canola | cytosol | 25.58 | 17.19 |
| KRG96720 | Soybean | cytosol | 25.12 | 17.14 |
| CDY39002 | Canola | cytosol | 25.58 | 17.08 |
| CDY42364 | Canola | cytosol | 25.58 | 17.08 |
| Bra038164.1-P | Field mustard | cytosol | 25.58 | 17.03 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 25.58 | 17.03 |
| Bra002851.1-P | Field mustard | cytosol | 25.12 | 16.88 |
| CDY28616 | Canola | cytosol | 25.12 | 16.88 |
| CDY17383 | Canola | cytosol | 25.12 | 16.88 |
| AT1G56430.1 | Thale cress | cytosol | 25.12 | 16.67 |
| KRH68436 | Soybean | cytosol | 24.65 | 16.51 |
| KRH36982 | Soybean | cytosol | 23.72 | 16.5 |
| CDY69948 | Canola | cytosol | 20.93 | 16.19 |
| Bra018573.1-P | Field mustard | cytosol | 24.19 | 16.1 |
| PGSC0003DMT400007275 | Potato | cytosol | 23.72 | 16.09 |
| CDX94991 | Canola | cytosol | 23.72 | 15.79 |
| CDX93517 | Canola | cytosol | 23.72 | 15.79 |
| Solyc01g100490.2.1 | Tomato | cytosol | 23.26 | 15.77 |
| AT1G09240.1 | Thale cress | cytosol | 22.79 | 15.31 |
| CDY46596 | Canola | cytosol | 14.42 | 14.9 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 18.6 | 14.08 |
| KRH43850 | Soybean | cytosol | 18.6 | 13.99 |
| KRH13614 | Soybean | cytosol | 17.67 | 13.29 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 4.19 | 10.71 |
| GSMUA_Achr11P... | Banana | cytosol | 28.37 | 10.32 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G055800.1 | EnsemblPlantsGene:TraesCS3D01G055800 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 | PFAM:PF03059 | PFscan:PS51142 |
| SEG:seg | MapMan:25.4.3.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:23091777..23092684
Molecular Weight (calculated)
23370.1 Da
IEP (calculated)
8.622
GRAVY (calculated)
-0.153
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAQNKEVAA LVEKITGLHA AIAKLPSLSP SPAIDALFTE LVTACAPPSP VDVTKLGPEA QEMREGLIRL CSEAEGKLEA HYSDMLAAFD NPLDHLGVFP
101: YYSNYVNLSK LRRAGKLFRV DTDVGARMSF HTAEVLAVCH PDDDVVNSVI IAHKSKDVVG NSSPSARPVF LNRYRRRRPI LCPLPPPARS LVPASSVRRY
201: GGGRGWGPQR FAIGE
101: YYSNYVNLSK LRRAGKLFRV DTDVGARMSF HTAEVLAVCH PDDDVVNSVI IAHKSKDVVG NSSPSARPVF LNRYRRRRPI LCPLPPPARS LVPASSVRRY
201: GGGRGWGPQR FAIGE
001: MGYCQDDQLV NKICDLYEKI SKLETLKPCE DVDTLFKQLV STCIPPNPNI DVTKMSENIQ EMRSNLIKIC GEAEGYLEHH FSSILTSFED NPLHHLNLFP
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
Arabidopsis Description
NAS4Probable nicotianamine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.