Factsheet for GSMUA_Achr5P21100_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P00420_001	Banana	cytosol	68.89	68.67
KRG96720	Soybean	cytosol	53.97	53.97
Solyc01g100490.2.1	Tomato	cytosol	53.97	53.63
PGSC0003DMT400007275	Potato	cytosol	53.65	53.31
VIT_14s0060g01190.t01	Wine grape	cytosol	54.6	53.25
KRH68436	Soybean	cytosol	53.97	52.96
KRH36982	Soybean	cytosol	50.79	51.78
HORVU6Hr1G032290.1	Barley	cytosol	43.49	51.31
CDX93517	Canola	cytosol	52.38	51.08
CDX98807	Canola	cytosol	47.94	50.84
CDX94991	Canola	cytosol	52.06	50.77
AT1G56430.1	Thale cress	cytosol	52.06	50.62
Bra018573.1-P	Field mustard	cytosol	51.75	50.46
Bra009407.1-P	Field mustard	cytosol	48.89	50.16
CDY39002	Canola	cytosol	51.11	50.0
Bra038164.1-P	Field mustard	cytosol	51.11	49.85
CDY42364	Canola	cytosol	50.79	49.69
CDX94325	Canola	cytosol	43.81	49.64
Zm00001d012829_P001	Maize	cytosol	18.1	49.57
AT1G09240.1	Thale cress	cytosol	50.16	49.38
CDX80931	Canola	cytosol	50.16	49.38
Bra005831.1-P	Field mustard	cytosol	49.84	49.06
AT5G04950.1	Thale cress	cytosol	49.52	48.75
CDY11321	Canola	cytosol	49.52	48.75
Bra002851.1-P	Field mustard	cytosol	49.21	48.44
Bra035602.1-P	Field mustard	cytosol	49.21	48.44
CDY64985	Canola	cytosol	49.21	48.44
CDY69948	Canola	cytosol	42.54	48.2
TraesCS6B01G438900.1	Wheat	cytosol, plastid	50.16	48.17
CDY06526	Canola	cytosol	48.89	48.12
CDY17383	Canola	cytosol	48.89	48.12
AT5G56080.1	Thale cress	cytosol	48.57	47.81
CDY28616	Canola	cytosol	48.57	47.81
TraesCS6D01G382900.1	Wheat	cytosol, plastid	49.52	47.56
TraesCS6A01G398700.1	Wheat	cytosol, plastid	49.21	47.26
Os03t0307200-01	Rice	endoplasmic reticulum	48.89	47.24
VIT_11s0052g01150.t01	Wine grape	plastid	42.22	46.83
TraesCS2A01G033500.1	Wheat	cytosol	41.59	46.79
CDX70180	Canola	cytosol	47.94	46.46
TraesCS6A01G386200.1	Wheat	cytosol	48.57	46.36
Zm00001d047651_P001	Maize	cytosol, endoplasmic reticulum, extracellular	47.94	46.18
Zm00001d047658_P001	Maize	cytosol	47.94	46.18
TraesCS2A01G095700.1	Wheat	cytosol	49.84	46.18
TraesCS2D01G033000.1	Wheat	peroxisome	43.49	46.13
TraesCS6B01G425200.1	Wheat	cytosol, peroxisome, plastid	48.25	46.06
TraesCS2B01G111100.1	Wheat	cytosol	49.52	45.88
HORVU4Hr1G053790.1	Barley	cytosol	47.94	45.76
TraesCS6A01G093000.1	Wheat	cytosol	47.62	45.45
TraesCS6D01G370800.1	Wheat	cytosol	47.62	45.45
TraesCS5A01G552000.1	Wheat	cytosol	47.94	45.35
HORVU2Hr1G015980.1	Barley	cytosol	48.89	45.29
TraesCS2D01G094200.1	Wheat	cytosol	48.89	45.29
Zm00001d047656_P001	Maize	cytosol	46.98	45.26
Os07t0689600-01	Rice	cytosol	49.21	45.19
HORVU0Hr1G017720.1	Barley	cytosol, plastid	38.1	44.94
EER93732	Sorghum	cytosol	51.75	44.9
TraesCS2B01G060800.1	Wheat	cytosol	46.98	44.85
TraesCS6A01G163100.1	Wheat	cytosol	46.35	44.79
HORVU4Hr1G089750.2	Barley	cytosol	28.57	44.78
TraesCS5A01G552400.1	Wheat	cytosol	47.3	44.74
TraesCSU01G125200.1	Wheat	cytosol	47.3	44.74
TraesCSU01G125500.1	Wheat	cytosol	47.3	44.74
TraesCS2A01G049900.1	Wheat	cytosol	46.67	44.55
TraesCS2D01G049200.1	Wheat	cytosol	46.67	44.55
TraesCS3A01G468300.1	Wheat	plastid	47.94	44.41
TraesCS6A01G165100.1	Wheat	cytosol	46.35	44.38
TraesCS6B01G186100.1	Wheat	cytosol	46.35	44.38
TraesCS6D01G148000.1	Wheat	cytosol	46.35	44.38
TraesCS4B01G183900.1	Wheat	cytosol	46.35	44.24
Zm00001d013655_P001	Maize	cytosol	49.84	44.1
Zm00001d022557_P001	Maize	cytosol	50.79	44.08
TraesCS6B01G187400.1	Wheat	cytosol	46.03	44.07
TraesCS6D01G148200.1	Wheat	cytosol	46.03	44.07
TraesCS2B01G047100.2	Wheat	cytosol	43.49	44.05
Zm00001d033496_P001	Maize	cytosol	49.84	43.73
TraesCS6A01G163200.1	Wheat	cytosol	43.81	43.67
TraesCS6D01G148600.1	Wheat	cytosol	45.4	43.47
HORVU4Hr1G053850.2	Barley	cytosol, plasma membrane	47.94	43.02
TraesCS3B01G068400.1	Wheat	cytosol	24.44	42.78
TraesCS3B01G068500.1	Wheat	cytosol	24.44	42.78
HORVU4Hr1G053770.1	Barley	cytosol	44.76	42.73
CDY09316	Canola	cytosol	13.97	42.72
KRH13614	Soybean	cytosol	38.73	42.66
KRH43850	Soybean	cytosol	38.73	42.66
HORVU6Hr1G090040.1	Barley	cytosol	47.62	41.78
AT4G26483.1	Thale cress	cytosol, extracellular, plastid	11.11	41.67
CDY01124	Canola	cytosol	15.87	39.68
Bra004521.1-P	Field mustard	cytosol	22.86	38.92
TraesCS4D01G184900.1	Wheat	plastid	46.67	38.28
GSMUA_Achr11P...	Banana	cytosol	71.43	38.07
CDY46596	Canola	cytosol	24.76	37.5
HORVU2Hr1G004960.1	Barley	mitochondrion	41.9	32.92
HORVU3Hr1G010650.1	Barley	plastid	24.76	30.59
HORVU4Hr1G089870.1	Barley	cytosol	20.0	30.0
TraesCS3D01G055800.1	Wheat	cytosol	20.32	29.77
KXG39528	Sorghum	cytosol	48.89	25.5
Zm00001d028888_P001	Maize	cytosol, extracellular	47.3	24.79
Zm00001d028887_P001	Maize	cytosol	46.98	24.63
HORVU6Hr1G090180.2	Barley	nucleus	47.62	24.59
TraesCSU01G125100.1	Wheat	cytosol, plasma membrane, vacuole	7.62	23.08
Zm00001d047639_P004	Maize	extracellular	47.3	15.07

Protein Annotations

MapMan:25.4.3.1.1	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030410	GO:GO:0030418	EnsemblPlantsGene:GSMUA_Achr5G21100_001
EnsemblPlants:GSMUA_Achr5P21100_001	EnsemblPlants:GSMUA_Achr5T21100_001	InterPro:IPR004298	UniProt:M0T0D9	InterPro:Nicotian_synth	PFAM:PF03059
PFscan:PS51142	PANTHER:PTHR32266	PANTHER:PTHR32266:SF10	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000294AEFA

Description

Nicotianamine synthase [Source:GMGC_GENE;Acc:GSMUA_Achr5G21100_001]

Coordinates

chr5:-:23012985..23013932

Molecular Weight (calculated)

34414.5 Da

IEP (calculated)

6.008

GRAVY (calculated)

0.101

Length

315 amino acids

Sequence
(BLAST)

001: MGNEEELLVQ RISEICDSIS KLPSLSPSED VDNLFTELVH LCIPVIPIDV VKLSSEVQAM RSKLIKLCGE AEGLLESHYS DVLTSFDNPL DHLSLFPYYS
101: NYLKLSHLEY SLLSRYVASP PARVAFVGSG PLPLSSVVLA ARHMQEAELH NYDLDATANA RARRLVQGDP GMAARMAFHT EDVLAVTHAL RGYDVVFLAA
201: LVGIGHDDKI RVVDHLARHM APGALLVARS AHGARAFLYP VVEPADLKGF EVLTVHHPAD EVINSVIVAR KPQGGHAAGA TAVVRPCKYC EMMQGFHHFG
301: HGTMMEEVAL EELPS

Best Arabidopsis Sequence Match ( AT1G56430.1 )
(BLAST)

001: MGYCQDDQLV NKICDLYEKI SKLETLKPCE DVDTLFKQLV STCIPPNPNI DVTKMSENIQ EMRSNLIKIC GEAEGYLEHH FSSILTSFED NPLHHLNLFP
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT

Arabidopsis Description

NAS4Probable nicotianamine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.