Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G033500.1 | Wheat | cytosol | 83.92 | 93.21 |
| TraesCS2D01G033000.1 | Wheat | peroxisome | 87.14 | 91.25 |
| HORVU2Hr1G004960.1 | Barley | mitochondrion | 83.6 | 64.84 |
| TraesCS2B01G060800.1 | Wheat | cytosol | 67.52 | 63.64 |
| TraesCS4B01G183900.1 | Wheat | cytosol | 67.2 | 63.33 |
| TraesCS6B01G187400.1 | Wheat | cytosol | 65.92 | 62.31 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 65.92 | 62.12 |
| TraesCS6B01G186100.1 | Wheat | cytosol | 65.27 | 61.7 |
| TraesCS2B01G111100.1 | Wheat | cytosol | 59.81 | 54.71 |
| TraesCS3B01G068400.1 | Wheat | cytosol | 30.23 | 52.22 |
| TraesCS3B01G068500.1 | Wheat | cytosol | 29.58 | 51.11 |
| TraesCS6B01G438900.1 | Wheat | cytosol, plastid | 49.2 | 46.65 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 44.05 | 43.49 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 42.44 | 41.77 |
| CDX98807 | Canola | cytosol | 39.87 | 41.75 |
| Solyc01g100490.2.1 | Tomato | cytosol | 41.8 | 41.01 |
| PGSC0003DMT400007275 | Potato | cytosol | 41.48 | 40.69 |
| AT5G04950.1 | Thale cress | cytosol | 41.48 | 40.31 |
| Bra009407.1-P | Field mustard | cytosol | 39.55 | 40.07 |
| AT1G09240.1 | Thale cress | cytosol | 40.84 | 39.69 |
| KRG96720 | Soybean | cytosol | 40.19 | 39.68 |
| CDY39002 | Canola | cytosol | 40.84 | 39.44 |
| CDY42364 | Canola | cytosol | 40.84 | 39.44 |
| CDY11321 | Canola | cytosol | 40.19 | 39.06 |
| Bra005831.1-P | Field mustard | cytosol | 40.19 | 39.06 |
| CDX80931 | Canola | cytosol | 40.19 | 39.06 |
| CDX94325 | Canola | cytosol | 34.73 | 38.85 |
| KRH68436 | Soybean | cytosol | 39.87 | 38.63 |
| CDY64985 | Canola | cytosol | 39.55 | 38.44 |
| CDY06526 | Canola | cytosol | 39.55 | 38.44 |
| Bra035602.1-P | Field mustard | cytosol | 39.55 | 38.44 |
| CDX93517 | Canola | cytosol | 39.87 | 38.39 |
| Bra038164.1-P | Field mustard | cytosol | 39.87 | 38.39 |
| KRH36982 | Soybean | cytosol | 37.94 | 38.19 |
| CDY69948 | Canola | cytosol | 34.08 | 38.13 |
| AT5G56080.1 | Thale cress | cytosol | 39.23 | 38.12 |
| CDX94991 | Canola | cytosol | 39.55 | 38.08 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 39.55 | 38.08 |
| Bra018573.1-P | Field mustard | cytosol | 39.55 | 38.08 |
| CDY28616 | Canola | cytosol | 38.91 | 37.81 |
| AT1G56430.1 | Thale cress | cytosol | 39.23 | 37.65 |
| CDX70180 | Canola | cytosol | 39.23 | 37.54 |
| Bra002851.1-P | Field mustard | cytosol | 38.59 | 37.5 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 34.08 | 37.32 |
| CDY17383 | Canola | cytosol | 38.26 | 37.19 |
| KRH43850 | Soybean | cytosol | 31.51 | 34.27 |
| KRH13614 | Soybean | cytosol | 31.51 | 34.27 |
| CDY46596 | Canola | cytosol | 22.83 | 34.13 |
| Bra004521.1-P | Field mustard | cytosol | 18.01 | 30.27 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 8.04 | 29.76 |
| CDY01124 | Canola | cytosol | 9.32 | 23.02 |
| GSMUA_Achr11P... | Banana | cytosol | 43.73 | 23.01 |
| CDY09316 | Canola | cytosol | 7.07 | 21.36 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G047100.2 | EnsemblPlantsGene:TraesCS2B01G047100 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | InterPro:SAM-dependent_MTases | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 | PFAM:PF03059 |
| PFscan:PS51142 | SUPFAM:SSF53335 | MapMan:25.4.3.1.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:23549342..23550688
Molecular Weight (calculated)
33402.9 Da
IEP (calculated)
4.935
GRAVY (calculated)
0.139
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAENSEVAA LVEKITGLHA AISKLASLSP SPEVDALFTE LVAACVPSSP VDVTKLGPEA QEMRQDLIRL CSAAEGLLEA HYSNMLTALD NPLDHLGRFP
101: YFDNYINLSK LEHDLLAGHV AAPARVAFIG SGPLPFSSLF LAMYHLPDTR FDNYDRCSVA NGRAMKLVGA ADEGVRARMA FHTAEVADLT AELGAYDVVF
201: LAALVGMTSE EKANTIAHLG KHMADGAVLV ARSAHGARAF LYPVVELDDI GRGGFQVLAV HHPAGDEVFN SFIVARKQEH ISTVGTIGCS WQHECIWTTI
301: EGVADGEMSF K
101: YFDNYINLSK LEHDLLAGHV AAPARVAFIG SGPLPFSSLF LAMYHLPDTR FDNYDRCSVA NGRAMKLVGA ADEGVRARMA FHTAEVADLT AELGAYDVVF
201: LAALVGMTSE EKANTIAHLG KHMADGAVLV ARSAHGARAF LYPVVELDDI GRGGFQVLAV HHPAGDEVFN SFIVARKQEH ISTVGTIGCS WQHECIWTTI
301: EGVADGEMSF K
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.