Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G165100.1 | Wheat | cytosol | 97.24 | 96.35 |
| TraesCS6D01G148200.1 | Wheat | cytosol | 96.93 | 96.05 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 92.94 | 95.89 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 77.61 | 94.76 |
| TraesCS6A01G093000.1 | Wheat | cytosol | 77.3 | 76.36 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 75.77 | 75.77 |
| TraesCS6A01G386200.1 | Wheat | cytosol | 75.46 | 74.55 |
| TraesCS5A01G552400.1 | Wheat | cytosol | 74.54 | 72.97 |
| TraesCS2A01G049900.1 | Wheat | cytosol | 73.62 | 72.73 |
| Zm00001d047658_P001 | Maize | cytosol | 72.09 | 71.87 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 72.09 | 71.87 |
| TraesCS5A01G552000.1 | Wheat | cytosol | 73.31 | 71.77 |
| Zm00001d047656_P001 | Maize | cytosol | 70.86 | 70.64 |
| TraesCS2A01G033500.1 | Wheat | cytosol | 60.12 | 70.0 |
| TraesCS2A01G095700.1 | Wheat | cytosol | 61.96 | 59.41 |
| TraesCS6A01G398700.1 | Wheat | cytosol, plastid | 50.31 | 50.0 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 45.71 | 47.15 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 44.79 | 46.35 |
| TraesCS3A01G468300.1 | Wheat | plastid | 46.32 | 44.41 |
| KRG96720 | Soybean | cytosol | 40.18 | 41.59 |
| PGSC0003DMT400007275 | Potato | cytosol | 40.18 | 41.32 |
| KXG39528 | Sorghum | cytosol | 76.07 | 41.06 |
| Solyc01g100490.2.1 | Tomato | cytosol | 39.88 | 41.01 |
| KRH36982 | Soybean | cytosol | 38.34 | 40.45 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 39.88 | 40.25 |
| KRH68436 | Soybean | cytosol | 39.57 | 40.19 |
| CDX94325 | Canola | cytosol | 34.05 | 39.93 |
| Bra038164.1-P | Field mustard | cytosol | 39.26 | 39.63 |
| AT1G09240.1 | Thale cress | cytosol | 38.65 | 39.38 |
| Bra018573.1-P | Field mustard | cytosol | 38.96 | 39.32 |
| CDX94991 | Canola | cytosol | 38.96 | 39.32 |
| CDY69948 | Canola | cytosol | 33.44 | 39.21 |
| CDY39002 | Canola | cytosol | 38.65 | 39.13 |
| CDY42364 | Canola | cytosol | 38.65 | 39.13 |
| CDX93517 | Canola | cytosol | 38.65 | 39.01 |
| AT1G56430.1 | Thale cress | cytosol | 38.65 | 38.89 |
| AT5G04950.1 | Thale cress | cytosol | 37.73 | 38.44 |
| Zm00001d028887_P001 | Maize | cytosol | 70.86 | 38.44 |
| CDX98807 | Canola | cytosol | 34.97 | 38.38 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 70.55 | 38.27 |
| CDY06526 | Canola | cytosol | 37.42 | 38.12 |
| Bra035602.1-P | Field mustard | cytosol | 37.42 | 38.12 |
| CDY64985 | Canola | cytosol | 37.42 | 38.12 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 9.82 | 38.1 |
| CDY28616 | Canola | cytosol | 37.12 | 37.81 |
| CDY17383 | Canola | cytosol | 37.12 | 37.81 |
| AT5G56080.1 | Thale cress | cytosol | 37.12 | 37.81 |
| Bra005831.1-P | Field mustard | cytosol | 37.12 | 37.81 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 32.82 | 37.68 |
| CDY46596 | Canola | cytosol | 23.93 | 37.5 |
| Bra002851.1-P | Field mustard | cytosol | 36.81 | 37.5 |
| Bra009407.1-P | Field mustard | cytosol | 35.28 | 37.46 |
| CDY11321 | Canola | cytosol | 36.5 | 37.19 |
| KRH43850 | Soybean | cytosol | 32.52 | 37.06 |
| CDX80931 | Canola | cytosol | 36.2 | 36.88 |
| KRH13614 | Soybean | cytosol | 31.9 | 36.36 |
| CDX70180 | Canola | cytosol | 36.2 | 36.31 |
| Bra004521.1-P | Field mustard | cytosol | 16.26 | 28.65 |
| Zm00001d047639_P004 | Maize | extracellular | 73.01 | 24.06 |
| GSMUA_Achr11P... | Banana | cytosol | 43.56 | 24.03 |
| CDY01124 | Canola | cytosol | 9.2 | 23.81 |
| CDY09316 | Canola | cytosol | 6.75 | 21.36 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G163100.1 | EnsemblPlantsGene:TraesCS6A01G163100 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | InterPro:SAM-dependent_MTases | ncoils:Coil | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 |
| PFAM:PF03059 | PFscan:PS51142 | SEG:seg | SUPFAM:SSF53335 | MapMan:25.4.3.1.1 | : |
Description
No Description!
Coordinates
chr6A:-:158316864..158317844
Molecular Weight (calculated)
34927.9 Da
IEP (calculated)
5.740
GRAVY (calculated)
0.064
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAQKMEVAA LIEKIAGLQA AIAGLPSLSP SPEVDRLFTD LVTACVPPSP VDVTKLSPEH QRMREALIRL CSAAEGKLEA HYADLLATFD NPLDHLGRFP
101: YYSNYVNLSR LEYELLARHV PGIAPARVAF VGSGPLPFSS FVLAAHHLPD AQFDNYDLCG AANERARKLF GAREDGVGAR MKFHTADVAD LTQELGAYDV
201: VFLAALVGMA AEEKAKVIAH LGAHMVEGAS LVVRSAHGAR GFLYPIVDPE DIRRGGFEVL AVHHPEGEVI NSVIVARKAV DAQLSGPQNG ARGAVPLVSP
301: PCSFSTKMEA SALEKSEELA TKELAF
101: YYSNYVNLSR LEYELLARHV PGIAPARVAF VGSGPLPFSS FVLAAHHLPD AQFDNYDLCG AANERARKLF GAREDGVGAR MKFHTADVAD LTQELGAYDV
201: VFLAALVGMA AEEKAKVIAH LGAHMVEGAS LVVRSAHGAR GFLYPIVDPE DIRRGGFEVL AVHHPEGEVI NSVIVARKAV DAQLSGPQNG ARGAVPLVSP
301: PCSFSTKMEA SALEKSEELA TKELAF
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.