Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G386200.1 | Wheat | cytosol | 87.19 | 94.85 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 85.79 | 93.33 |
| TraesCS6D01G370800.1 | Wheat | cytosol | 85.52 | 93.03 |
| HORVU4Hr1G053790.1 | Barley | cytosol | 84.68 | 92.12 |
| HORVU4Hr1G089750.2 | Barley | cytosol | 49.3 | 88.06 |
| HORVU4Hr1G053850.2 | Barley | cytosol, plasma membrane | 85.24 | 87.18 |
| HORVU4Hr1G053770.1 | Barley | cytosol | 77.44 | 84.24 |
| Zm00001d047658_P001 | Maize | cytosol | 67.97 | 74.62 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 67.97 | 74.62 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 55.43 | 74.53 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 66.3 | 73.01 |
| Zm00001d047656_P001 | Maize | cytosol | 66.3 | 72.78 |
| HORVU4Hr1G089870.1 | Barley | cytosol | 36.77 | 62.86 |
| HORVU2Hr1G015980.1 | Barley | cytosol | 57.94 | 61.18 |
| HORVU6Hr1G090180.2 | Barley | nucleus | 91.92 | 54.1 |
| HORVU2Hr1G004960.1 | Barley | mitochondrion | 55.43 | 49.63 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 42.34 | 48.1 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 41.78 | 47.62 |
| HORVU3Hr1G010650.1 | Barley | plastid | 31.48 | 44.31 |
| HORVU0Hr1G017720.1 | Barley | cytosol, plastid | 32.87 | 44.19 |
| Solyc01g100490.2.1 | Tomato | cytosol | 38.44 | 43.53 |
| PGSC0003DMT400007275 | Potato | cytosol | 37.88 | 42.9 |
| AT1G09240.1 | Thale cress | cytosol | 38.16 | 42.81 |
| Bra018573.1-P | Field mustard | cytosol | 38.44 | 42.72 |
| CDX93517 | Canola | cytosol | 38.16 | 42.41 |
| CDX94991 | Canola | cytosol | 38.16 | 42.41 |
| CDX98807 | Canola | cytosol | 34.82 | 42.09 |
| KXG39528 | Sorghum | cytosol | 69.64 | 41.39 |
| CDY06526 | Canola | cytosol | 36.77 | 41.25 |
| AT5G56080.1 | Thale cress | cytosol | 36.77 | 41.25 |
| Bra035602.1-P | Field mustard | cytosol | 36.77 | 41.25 |
| CDY64985 | Canola | cytosol | 36.77 | 41.25 |
| Bra038164.1-P | Field mustard | cytosol | 37.05 | 41.18 |
| CDY42364 | Canola | cytosol | 36.77 | 40.99 |
| KRG96720 | Soybean | cytosol | 35.93 | 40.95 |
| AT5G04950.1 | Thale cress | cytosol | 36.49 | 40.94 |
| Bra009407.1-P | Field mustard | cytosol | 34.82 | 40.72 |
| CDY39002 | Canola | cytosol | 36.49 | 40.68 |
| CDX94325 | Canola | cytosol | 31.48 | 40.65 |
| Zm00001d028887_P001 | Maize | cytosol | 67.69 | 40.43 |
| AT1G56430.1 | Thale cress | cytosol | 36.49 | 40.43 |
| CDY28616 | Canola | cytosol | 35.93 | 40.31 |
| Bra002851.1-P | Field mustard | cytosol | 35.93 | 40.31 |
| CDY17383 | Canola | cytosol | 35.93 | 40.31 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 36.21 | 40.25 |
| CDY11321 | Canola | cytosol | 35.65 | 40.0 |
| Bra005831.1-P | Field mustard | cytosol | 35.65 | 40.0 |
| CDY69948 | Canola | cytosol | 30.92 | 39.93 |
| KRH68436 | Soybean | cytosol | 35.65 | 39.88 |
| KRH36982 | Soybean | cytosol | 34.26 | 39.81 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 66.57 | 39.77 |
| CDX80931 | Canola | cytosol | 35.38 | 39.69 |
| CDX70180 | Canola | cytosol | 34.54 | 38.15 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 8.64 | 36.9 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 28.41 | 35.92 |
| CDY46596 | Canola | cytosol | 20.61 | 35.58 |
| KRH43850 | Soybean | cytosol | 27.86 | 34.97 |
| KRH13614 | Soybean | cytosol | 27.3 | 34.27 |
| Bra004521.1-P | Field mustard | cytosol | 15.04 | 29.19 |
| GSMUA_Achr11P... | Banana | cytosol | 42.06 | 25.55 |
| Zm00001d047639_P004 | Maize | extracellular | 68.52 | 24.87 |
| CDY01124 | Canola | cytosol | 8.36 | 23.81 |
| CDY09316 | Canola | cytosol | 5.85 | 20.39 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G090040.1 | EnsemblPlantsGene:HORVU6Hr1G090040 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | InterPro:SAM-dependent_MTases | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 | PFAM:PF03059 |
| PFscan:PS51142 | SUPFAM:SSF53335 | UniParc:UPI000B46720A | UniProt:A0A287V4Q2 | MapMan:25.4.3.1.1 | : |
Description
No Description!
Coordinates
chrchr6H:+:571261641..571262720
Molecular Weight (calculated)
38755.1 Da
IEP (calculated)
5.376
GRAVY (calculated)
-0.023
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: IKQLDRPHHY RSTVPQSSSL VRYQEDIKMD AQSKEVDALV QKITGLHAAI AKLPSLSPSP DVDALFTDLV TACVPPSPVD VTKLAPEAQA MREGLIRLCS
101: EAEGKLEAHY SDMLAAFDNP LDHLGVFPYY SNYINLSKLE YELLARYVPG GIAPARVAFI GSGPLPFSSY VLAARHLPDT VFDNYDLCGA ANDRASRLFR
201: ADKDVGARMS FHTADVADLT DELATYDVVF LAALVGMAAE DKAKVIAHLG AHMADGAALV VRSAHGARGF LYPIVDPQDI GRGGFEVLAV CHPDDDVVNS
301: VIIAQKSNDV HEYGLGSGRG GRYARGTVVP VVSPPCRFGE MVADVTQKRE EFAKAEVAF
101: EAEGKLEAHY SDMLAAFDNP LDHLGVFPYY SNYINLSKLE YELLARYVPG GIAPARVAFI GSGPLPFSSY VLAARHLPDT VFDNYDLCGA ANDRASRLFR
201: ADKDVGARMS FHTADVADLT DELATYDVVF LAALVGMAAE DKAKVIAHLG AHMADGAALV VRSAHGARGF LYPIVDPQDI GRGGFEVLAV CHPDDDVVNS
301: VIIAQKSNDV HEYGLGSGRG GRYARGTVVP VVSPPCRFGE MVADVTQKRE EFAKAEVAF
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.