Skip to main content
crop-pal logo
Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g111710.2.1 Tomato nucleus 87.06 87.06
PGSC0003DMT400015774 Potato nucleus 87.68 86.44
VIT_18s0001g01120.t01 Wine grape nucleus 86.04 86.04
GSMUA_Achr11P... Banana cytosol, nucleus, plastid 84.19 84.02
Os09t0541900-01 Rice cytosol, nucleus, plastid 79.26 79.26
Os08t0550100-01 Rice plasma membrane 78.64 78.81
TraesCS4D01G265700.1 Wheat unclear 78.64 78.48
TraesCS4B01G265800.1 Wheat plastid 78.64 78.48
TraesCS4B01G265700.1 Wheat plastid 78.64 78.48
TraesCS4A01G044600.1 Wheat golgi 78.64 78.16
HORVU4Hr1G071480.8 Barley plastid 78.85 77.58
EES14113 Sorghum cytosol, nucleus, plastid 78.44 77.02
HORVU5Hr1G084540.1 Barley cytosol, nucleus, plastid 78.03 76.61
TraesCS5A01G335200.1 Wheat golgi 77.82 76.41
TraesCS5D01G340000.1 Wheat cytosol, nucleus, plastid 77.62 76.21
Zm00001d053232_P005 Maize cytosol, nucleus, plastid 78.85 75.59
GSMUA_Achr8P13090_001 Banana cytosol 37.37 75.21
GSMUA_Achr5P18970_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 84.19 74.55
GSMUA_Achr8P13080_001 Banana cytosol, extracellular, plastid 40.66 73.06
Zm00001d032010_P007 Maize cytosol, nucleus, plastid 77.82 72.61
HORVU7Hr1G080070.2 Barley cytosol 9.03 45.83
Protein Annotations
Gene3D:1.25.40.570EntrezGene:100264130wikigene:100264130MapMan:19.2.6.2.2.3InterPro:26S_Psome_reg_CProteinID:CCB60608
ProteinID:CCB60608.1ncoils:CoilUniProt:F6I0Z2EMBL:FN596508GO:GO:0000502GO:GO:0003674
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006511GO:GO:0008150GO:GO:0008152
GO:GO:0008541GO:GO:0009056GO:GO:0009987GO:GO:0019538GO:GO:0030234GO:GO:0042176
GO:GO:0050790InterPro:IPR000717EntrezGene:LOC100264130wikigene:LOC100264130InterPro:PCI_domPFAM:PF01399
PFAM:PF08375PFscan:PS50250PANTHER:PTHR10758PANTHER:PTHR10758:SF7SMART:SM00088SMART:SM00753
SUPFAM:SSF46785TIGR:TC52112TIGR:TC59220UniParc:UPI00015C8497ArrayExpress:VIT_03s0038g02590EnsemblPlantsGene:VIT_03s0038g02590
EnsemblPlants:VIT_03s0038g02590.t01unigene:Vvi.3192InterPro:WH_DNA-bd_sfRefSeq:XP_002279715RefSeq:XP_002279715.1SEG:seg
Description
No Description!
Coordinates
chr3:-:1801880..1806519
Molecular Weight (calculated)
55651.8 Da
IEP (calculated)
9.098
GRAVY (calculated)
-0.375
Length
487 amino acids
Sequence
(BLAST)
001: MTQDVEMKEL PAPSNSVTST TPSTLQHLKE IASLIESSAY AREVRRIVRA IRLTMILRRK LKATVLSGFL NYALNPGSEV HTRLSSYLPK EDEHDMEVDT
101: ATSATQTPAK HPLPELEIYC YLLVLIFLID QKKYKEAKAC SAASITRLKN LNRRTIDVLA SRLYSYYSLS YELTGDLAEI RGNLLALHRI ATLRHDELGQ
201: ETLLNLLLRN YLHYNLYDQA EKLRSKAPRF EAHSNQQFCR YLFYLGKIRT IQLEYTDAKE SLLQAARKAP VSALGFRVQC NKWAVIVRLL LGEIPERTVF
301: MQKGMEKALR PYFELTNAVR IGDLELFKSV AEKFSTTFSS DRTHNLIVRL RHNVIRTGLR NISISYSRIS LADVAQKLRL DSANPIADAE SIVAKAIRDG
401: AIDATLDHAN GWMVSKETGD IYSTNEPQFA FNSRIAFCLN MHNDAVRALR FPPNSHKEKE SAEKRRERQQ QEQELAKHIA EEDDDEF
Best Arabidopsis Sequence Match ( AT1G20200.1 )
(BLAST)
001: MTQDVEMKDN NTPSQSIISS STSTMQNLKE IAALIDTGSY TKEVRRIARA VRLTIGLRQK LTGSVLSSFL DFALVPGSEA HSRLSSFVPK GDEHDMEVDT
101: ASSATQAAPS KHLPAELEIY CYFIVLLFLI DQKKYNEAKA CSSASIARLK NVNRRTIDVI ASRLYFYYSL SYEQTGDLAE IRGTLLALHH SATLRHDELG
201: QETLLNLLLR NYLHYNLYDQ AEKLRSKAPR FEAHSNQQFC RYLFYLGKIR TIQLEYTDAK ESLLQAARKA PIAALGFRIQ CNKWAILVRL LLGEIPERSI
301: FTQKGMEKAL RPYFELTNAV RIGDLELFRT VQEKFLDTFA QDRTHNLIVR LRHNVIRTGL RNISISYSRI SLPDVAKKLR LNSENPVADA ESIVAKAIRD
401: GAIDATIDHK NGCMVSKETG DIYSTNEPQT AFNSRIAFCL NMHNEAVRAL RFPPNTHKEK ESDEKRRERK QQEEELAKHM AEEDDDDF
Arabidopsis Description
RPN3A26S proteasome non-ATPase regulatory subunit 3 homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.