Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT1G67100.1 | Thale cress | mitochondrion | 51.24 | 62.23 |
GSMUA_Achr4P06820_001 | Banana | cytosol, mitochondrion, plastid | 50.88 | 61.54 |
GSMUA_Achr4P13790_001 | Banana | mitochondrion | 50.18 | 61.21 |
KRG93864 | Soybean | nucleus | 62.9 | 60.75 |
KRH18248 | Soybean | nucleus | 61.13 | 60.07 |
GSMUA_Achr9P21360_001 | Banana | mitochondrion | 47.0 | 59.38 |
VIT_01s0011g03540.t01 | Wine grape | nucleus | 52.65 | 58.89 |
CDY12617 | Canola | mitochondrion | 51.24 | 58.7 |
CDY42342 | Canola | mitochondrion | 51.24 | 58.7 |
VIT_17s0000g03720.t01 | Wine grape | mitochondrion, nucleus, plastid | 53.36 | 55.51 |
VIT_01s0011g03530.t01 | Wine grape | cytosol, nucleus, plastid | 42.4 | 49.79 |
VIT_03s0091g00670.t01 | Wine grape | cytosol | 30.04 | 43.59 |
GSMUA_Achr4P03700_001 | Banana | cytosol, mitochondrion, nucleus | 48.76 | 42.33 |
VIT_07s0129g00330.t01 | Wine grape | nucleus | 33.92 | 42.11 |
VIT_18s0001g09250.t01 | Wine grape | nucleus | 31.1 | 39.64 |
Os01t0129600-00 | Rice | cytosol | 32.86 | 27.43 |
Protein Annotations
EntrezGene:100261743 | wikigene:100261743 | MapMan:15.5.24 | UniProt:A5BBT8 | EMBL:AM453811 | ProteinID:CAN72182 |
ProteinID:CAN72182.1 | ProteinID:CCB57716 | ProteinID:CCB57716.1 | ncoils:Coil | EMBL:FN596245 | GO:GO:0008150 |
GO:GO:0009719 | GO:GO:0009739 | InterPro:IPR004883 | InterPro:LOB | InterPro:LOBD | EntrezGene:LOC100261743 |
wikigene:LOC100261743 | PFAM:PF03195 | PIRSF:PIRSF038155 | PFscan:PS50891 | PANTHER:PTHR31304 | PANTHER:PTHR31304:SF9 |
UniParc:UPI0001520A3F | ArrayExpress:VIT_14s0006g02950 | EnsemblPlantsGene:VIT_14s0006g02950 | EnsemblPlants:VIT_14s0006g02950.t01 | unigene:Vvi.17322 | RefSeq:XP_002283795 |
RefSeq:XP_002283795.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr14:+:21211129..21212319
Molecular Weight (calculated)
30876.6 Da
IEP (calculated)
8.639
GRAVY (calculated)
-0.563
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMSCNGCRV LRKGCSDNCT IRPCLQWIKT PESQANATVF LAKFYGRAGL MNLINSGPEH LRPAIFSSLL YEACGRIVNP IYGSVGLLWS GSWHLCQAAV
101: EAVLKGEPIT QITSEAAATG QGPPLKAYDI RHVSKDENSA ANDLHRAKNR CRFKRSGVRA KSGNKAGTNS VAESKQGMNR GSLADELNRS TSHDSTVSHP
201: SEPHTVEGES RETVSMVSVE TAEPSFLFRA EQKRVQKPEK REENRGLELE LTLGLGPIQS ERYMSGKTGG YGPSDGEGCK MEM
101: EAVLKGEPIT QITSEAAATG QGPPLKAYDI RHVSKDENSA ANDLHRAKNR CRFKRSGVRA KSGNKAGTNS VAESKQGMNR GSLADELNRS TSHDSTVSHP
201: SEPHTVEGES RETVSMVSVE TAEPSFLFRA EQKRVQKPEK REENRGLELE LTLGLGPIQS ERYMSGKTGG YGPSDGEGCK MEM
001: MRMSCNGCRV LRKGCSEDCS IRPCLAWIKS PEAQANATVF LAKFYGRAGL MNLINAGPNH LRPGIFRSLL HEACGRIVNP IYGSVGLLWS GNWQLCQDAV
101: EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE
201: SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT CQKESTCKTE LML
101: EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE
201: SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT CQKESTCKTE LML
Arabidopsis Description
LBD41LOB domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9M886]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.