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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 4
  • mitochondrion 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G67100.1 Thale cress mitochondrion 51.24 62.23
GSMUA_Achr4P06820_001 Banana cytosol, mitochondrion, plastid 50.88 61.54
GSMUA_Achr4P13790_001 Banana mitochondrion 50.18 61.21
KRG93864 Soybean nucleus 62.9 60.75
KRH18248 Soybean nucleus 61.13 60.07
GSMUA_Achr9P21360_001 Banana mitochondrion 47.0 59.38
VIT_01s0011g03540.t01 Wine grape nucleus 52.65 58.89
CDY12617 Canola mitochondrion 51.24 58.7
CDY42342 Canola mitochondrion 51.24 58.7
VIT_17s0000g03720.t01 Wine grape mitochondrion, nucleus, plastid 53.36 55.51
VIT_01s0011g03530.t01 Wine grape cytosol, nucleus, plastid 42.4 49.79
VIT_03s0091g00670.t01 Wine grape cytosol 30.04 43.59
GSMUA_Achr4P03700_001 Banana cytosol, mitochondrion, nucleus 48.76 42.33
VIT_07s0129g00330.t01 Wine grape nucleus 33.92 42.11
VIT_18s0001g09250.t01 Wine grape nucleus 31.1 39.64
Os01t0129600-00 Rice cytosol 32.86 27.43
Protein Annotations
EntrezGene:100261743wikigene:100261743MapMan:15.5.24UniProt:A5BBT8EMBL:AM453811ProteinID:CAN72182
ProteinID:CAN72182.1ProteinID:CCB57716ProteinID:CCB57716.1ncoils:CoilEMBL:FN596245GO:GO:0008150
GO:GO:0009719GO:GO:0009739InterPro:IPR004883InterPro:LOBInterPro:LOBDEntrezGene:LOC100261743
wikigene:LOC100261743PFAM:PF03195PIRSF:PIRSF038155PFscan:PS50891PANTHER:PTHR31304PANTHER:PTHR31304:SF9
UniParc:UPI0001520A3FArrayExpress:VIT_14s0006g02950EnsemblPlantsGene:VIT_14s0006g02950EnsemblPlants:VIT_14s0006g02950.t01unigene:Vvi.17322RefSeq:XP_002283795
RefSeq:XP_002283795.1SEG:seg::::
Description
No Description!
Coordinates
chr14:+:21211129..21212319
Molecular Weight (calculated)
30876.6 Da
IEP (calculated)
8.639
GRAVY (calculated)
-0.563
Length
283 amino acids
Sequence
(BLAST)
001: MRMSCNGCRV LRKGCSDNCT IRPCLQWIKT PESQANATVF LAKFYGRAGL MNLINSGPEH LRPAIFSSLL YEACGRIVNP IYGSVGLLWS GSWHLCQAAV
101: EAVLKGEPIT QITSEAAATG QGPPLKAYDI RHVSKDENSA ANDLHRAKNR CRFKRSGVRA KSGNKAGTNS VAESKQGMNR GSLADELNRS TSHDSTVSHP
201: SEPHTVEGES RETVSMVSVE TAEPSFLFRA EQKRVQKPEK REENRGLELE LTLGLGPIQS ERYMSGKTGG YGPSDGEGCK MEM
Best Arabidopsis Sequence Match ( AT3G02550.1 )
(BLAST)
001: MRMSCNGCRV LRKGCSEDCS IRPCLAWIKS PEAQANATVF LAKFYGRAGL MNLINAGPNH LRPGIFRSLL HEACGRIVNP IYGSVGLLWS GNWQLCQDAV
101: EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE
201: SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT CQKESTCKTE LML
Arabidopsis Description
LBD41LOB domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9M886]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.