Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18248 | Soybean | nucleus | 91.13 | 92.71 |
| AT1G67100.1 | Thale cress | mitochondrion | 55.29 | 69.53 |
| KRH46923 | Soybean | mitochondrion | 68.6 | 67.91 |
| KRH01759 | Soybean | mitochondrion | 69.62 | 67.77 |
| KRH05602 | Soybean | nucleus | 13.99 | 67.21 |
| GSMUA_Achr4P06820_001 | Banana | cytosol, mitochondrion, plastid | 52.22 | 65.38 |
| CDY12617 | Canola | mitochondrion | 54.95 | 65.18 |
| CDY42342 | Canola | mitochondrion | 54.95 | 65.18 |
| GSMUA_Achr4P13790_001 | Banana | mitochondrion | 50.51 | 63.79 |
| VIT_14s0006g02950.t01 | Wine grape | mitochondrion | 60.75 | 62.9 |
| GSMUA_Achr9P21360_001 | Banana | mitochondrion | 47.44 | 62.05 |
| KRH45269 | Soybean | nucleus | 35.84 | 47.95 |
| KRH48482 | Soybean | mitochondrion | 35.84 | 45.26 |
| GSMUA_Achr4P03700_001 | Banana | cytosol, mitochondrion, nucleus | 49.83 | 44.79 |
| KRG90816 | Soybean | nucleus | 34.13 | 44.64 |
| KRH15442 | Soybean | mitochondrion, nucleus | 25.6 | 43.86 |
| KRH35680 | Soybean | cytosol, mitochondrion, nucleus | 24.57 | 42.11 |
| KRH61393 | Soybean | nucleus | 26.28 | 41.62 |
| KRG91097 | Soybean | mitochondrion, nucleus, plasma membrane | 23.89 | 40.94 |
| KRH04451 | Soybean | nucleus | 30.38 | 38.7 |
| KRH58049 | Soybean | mitochondrion, nucleus | 29.69 | 38.33 |
| KRH28374 | Soybean | nucleus | 30.38 | 37.08 |
| KRH77108 | Soybean | nucleus | 30.38 | 36.63 |
| KRH05603 | Soybean | cytosol, extracellular | 12.29 | 33.96 |
| Os01t0129600-00 | Rice | cytosol | 32.42 | 28.02 |
Protein Annotations
| EMBL:ACUP02011636 | EnsemblPlants:KRG93864 | EnsemblPlantsGene:GLYMA_19G046300 | EntrezGene:100786490 | InterPro:IPR004883 | InterPro:LOB |
| InterPro:LOBD | PANTHER:PTHR31304 | PANTHER:PTHR31304:SF8 | PFAM:PF03195 | PFscan:PS50891 | PIRSF:PIRSF038155 |
| ProteinID:KRG93864 | ProteinID:KRG93864.1 | SEG:seg | UniParc:UPI000233EBD2 | UniProt:I1N6Q1 | MapMan:15.5.24 |
Description
hypothetical protein
Coordinates
chr19:-:7119141..7121108
Molecular Weight (calculated)
31812.8 Da
IEP (calculated)
7.407
GRAVY (calculated)
-0.421
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMSCNGCRV LRKGCSEDCS IRPCLQWIKN PESQANATVF LAKFYGRAGL MNLINAGPES LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV
101: EAILKGEPIT PITSEAAANG RAPPLKAYDI RHVSKDENSA NETPKAKTRS RFNRTGSTLI KPKASKGTPT GFVPIEPVEP ETANRTTSHE SGLSHLSEAA
201: VMVEGESKES ESDVSVETSN LFHEEPESVA KTSDRTGESG NEIGLELTLG FEPVSRVHHV VPMKKRKIIA SKSYGDSAEK DSCKMELGLE YPA
101: EAILKGEPIT PITSEAAANG RAPPLKAYDI RHVSKDENSA NETPKAKTRS RFNRTGSTLI KPKASKGTPT GFVPIEPVEP ETANRTTSHE SGLSHLSEAA
201: VMVEGESKES ESDVSVETSN LFHEEPESVA KTSDRTGESG NEIGLELTLG FEPVSRVHHV VPMKKRKIIA SKSYGDSAEK DSCKMELGLE YPA
001: MRMSCNGCRV LRKGCSEDCS IRPCLAWIKS PEAQANATVF LAKFYGRAGL MNLINAGPNH LRPGIFRSLL HEACGRIVNP IYGSVGLLWS GNWQLCQDAV
101: EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE
201: SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT CQKESTCKTE LML
101: EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE
201: SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT CQKESTCKTE LML
Arabidopsis Description
LBD41LOB domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9M886]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.