Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P22720_001 | Banana | cytosol, mitochondrion, nucleus | 29.46 | 72.53 |
| KRH05602 | Soybean | nucleus | 16.52 | 60.66 |
| KRH45269 | Soybean | nucleus | 47.32 | 48.4 |
| Os01t0511000-01 | Rice | cytosol, nucleus, plastid | 36.16 | 43.55 |
| AT1G68510.1 | Thale cress | mitochondrion, nucleus | 42.86 | 41.2 |
| Bra004315.1-P | Field mustard | mitochondrion | 41.52 | 39.24 |
| CDX96013 | Canola | mitochondrion | 41.52 | 39.24 |
| CDY38588 | Canola | cytosol, mitochondrion, nucleus | 41.96 | 39.17 |
| VIT_01s0011g03530.t01 | Wine grape | cytosol, nucleus, plastid | 41.96 | 39.0 |
| KRH48482 | Soybean | mitochondrion | 40.18 | 38.79 |
| GSMUA_Achr2P14600_001 | Banana | mitochondrion | 41.07 | 38.33 |
| KRH15442 | Soybean | mitochondrion, nucleus | 29.02 | 38.01 |
| GSMUA_Achr9P00580_001 | Banana | mitochondrion | 39.29 | 37.61 |
| Solyc05g009320.2.1 | Tomato | mitochondrion | 42.41 | 37.4 |
| PGSC0003DMT400037711 | Potato | mitochondrion | 41.52 | 36.76 |
| GSMUA_Achr1P20970_001 | Banana | mitochondrion | 41.07 | 36.65 |
| HORVU3Hr1G016320.1 | Barley | cytosol, nucleus, plastid | 45.98 | 36.52 |
| TraesCS3B01G106900.1 | Wheat | cytosol, mitochondrion, nucleus | 47.32 | 35.93 |
| KRH18248 | Soybean | nucleus | 45.54 | 35.42 |
| KRH35680 | Soybean | cytosol, mitochondrion, nucleus | 26.79 | 35.09 |
| TraesCS4B01G361200.1 | Wheat | nucleus | 42.86 | 34.66 |
| Zm00001d010749_P001 | Maize | plastid | 43.75 | 34.63 |
| TraesCS4D01G354200.1 | Wheat | nucleus | 42.41 | 34.55 |
| KRG91097 | Soybean | mitochondrion, nucleus, plasma membrane | 26.34 | 34.5 |
| KRH46923 | Soybean | mitochondrion | 45.54 | 34.46 |
| TraesCS3D01G091700.1 | Wheat | cytosol, nucleus, plastid | 45.54 | 34.34 |
| KRG93864 | Soybean | nucleus | 44.64 | 34.13 |
| TraesCS5A01G529400.1 | Wheat | nucleus | 40.62 | 33.96 |
| KRH01759 | Soybean | mitochondrion | 45.54 | 33.89 |
| KRH61393 | Soybean | nucleus | 27.68 | 33.51 |
| EES02556 | Sorghum | mitochondrion | 43.3 | 32.66 |
| TraesCS5A01G529300.1 | Wheat | cytosol, nucleus, plastid | 41.96 | 32.53 |
| Zm00001d038717_P001 | Maize | cytosol, mitochondrion, nucleus | 46.43 | 32.5 |
| Zm00001d010751_P001 | Maize | cytosol, mitochondrion, nucleus | 45.09 | 32.27 |
| Zm00001d040004_P001 | Maize | mitochondrion | 42.86 | 32.21 |
| TraesCS4D01G354100.1 | Wheat | cytosol, nucleus, plastid | 41.96 | 31.54 |
| TraesCS4B01G361100.1 | Wheat | cytosol, nucleus, plastid | 41.07 | 31.4 |
| KRH04451 | Soybean | nucleus | 31.7 | 30.87 |
| Zm00001d029506_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 42.41 | 30.35 |
| HORVU4Hr1G086700.1 | Barley | cytosol, nucleus | 40.18 | 30.0 |
| KRH58049 | Soybean | mitochondrion, nucleus | 30.36 | 29.96 |
| KRH28374 | Soybean | nucleus | 31.7 | 29.58 |
| KRH77108 | Soybean | nucleus | 31.7 | 29.22 |
| KXG22356 | Sorghum | plastid | 43.3 | 29.22 |
| OQU92400 | Sorghum | mitochondrion, nucleus, plastid | 42.41 | 28.96 |
| KRH05603 | Soybean | cytosol, extracellular | 13.39 | 28.3 |
| KXG22716 | Sorghum | plastid | 41.96 | 22.87 |
Protein Annotations
| EMBL:ACUP02012643 | EnsemblPlants:KRG90816 | EnsemblPlantsGene:GLYMA_20G115700 | EntrezGene:100779034 | InterPro:IPR004883 | InterPro:LOB |
| PANTHER:PTHR31304 | PANTHER:PTHR31304:SF7 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRG90816 | ProteinID:KRG90816.1 |
| UniParc:UPI000233F1B4 | UniProt:I1NFI9 | MapMan:15.5.24 | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:35747915..35749389
Molecular Weight (calculated)
24784.0 Da
IEP (calculated)
8.866
GRAVY (calculated)
-0.292
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSCNGCRI LRKGCNDNCI IRPCLEWMNS PESQANATLF LAKFYGRTGL LNLITAAPQH LGPVVFRSLL YEACGRLVNP TYGSLGLFWT GEWAQCEAAV
101: DAVLTGSKIN GVAPSDGHTS GTLASDHILS TCDIRHMKNG TNVDDMRGRI QFKNVKQVIK PKPRMGSIDS TMLWKPNCQS QSMETIEASL VSQDELNRVR
201: KIKLDLELTL GFRCQSTNGK KTHY
101: DAVLTGSKIN GVAPSDGHTS GTLASDHILS TCDIRHMKNG TNVDDMRGRI QFKNVKQVIK PKPRMGSIDS TMLWKPNCQS QSMETIEASL VSQDELNRVR
201: KIKLDLELTL GFRCQSTNGK KTHY
001: MRMSCNGCRV LRKGCSENCS IRPCLQWIKS AESQANATVF LAKFYGRAGL MNLLNTGPDH LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GNWHLCQAAV
101: EAVMRGSPVT PIACDAAVTG QAPPFNNKLC DIRHVSSRDE NVKRRSRGAC KEERNVRSLS HESSLSHESP VSSEETTTEE PKTWIGLELT LGLEPLARGN
201: HVVVPMKKRK LERCGTSEDE DTCKIELGLV CSE
101: EAVMRGSPVT PIACDAAVTG QAPPFNNKLC DIRHVSSRDE NVKRRSRGAC KEERNVRSLS HESSLSHESP VSSEETTTEE PKTWIGLELT LGLEPLARGN
201: HVVVPMKKRK LERCGTSEDE DTCKIELGLV CSE
Arabidopsis Description
LBD40LOB domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW96]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.