Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH05602 | Soybean | nucleus | 15.09 | 57.38 |
| PGSC0003DMT400014630 | Potato | mitochondrion, nucleus, plastid | 50.43 | 47.95 |
| Solyc03g119530.2.1 | Tomato | cytosol, nucleus, plastid | 50.86 | 47.77 |
| KRH45269 | Soybean | nucleus | 40.52 | 42.92 |
| KRG90816 | Soybean | nucleus | 38.79 | 40.18 |
| VIT_17s0000g03720.t01 | Wine grape | mitochondrion, nucleus, plastid | 45.69 | 38.97 |
| KRH15442 | Soybean | mitochondrion, nucleus | 28.02 | 38.01 |
| KRH18248 | Soybean | nucleus | 45.69 | 36.81 |
| KRG91097 | Soybean | mitochondrion, nucleus, plasma membrane | 26.72 | 36.26 |
| KRG93864 | Soybean | nucleus | 45.26 | 35.84 |
| KRH46923 | Soybean | mitochondrion | 45.26 | 35.47 |
| KRH01759 | Soybean | mitochondrion | 45.69 | 35.22 |
| KRH61393 | Soybean | nucleus | 28.02 | 35.14 |
| KRH35680 | Soybean | cytosol, mitochondrion, nucleus | 25.86 | 35.09 |
| HORVU2Hr1G066080.1 | Barley | nucleus | 44.4 | 34.11 |
| TraesCS2B01G289800.1 | Wheat | nucleus | 44.4 | 34.11 |
| TraesCS2D01G270100.1 | Wheat | nucleus | 44.4 | 33.99 |
| TraesCS2A01G271300.1 | Wheat | nucleus | 44.4 | 33.55 |
| KRH58049 | Soybean | mitochondrion, nucleus | 30.17 | 30.84 |
| KRH28374 | Soybean | nucleus | 31.9 | 30.83 |
| KRH77108 | Soybean | nucleus | 31.9 | 30.45 |
| KRH04451 | Soybean | nucleus | 30.17 | 30.43 |
| KRH05603 | Soybean | cytosol, extracellular | 12.93 | 28.3 |
Protein Annotations
| EMBL:ACUP02004241 | EnsemblPlants:KRH48482 | EnsemblPlantsGene:GLYMA_07G091600 | EntrezGene:100802646 | InterPro:IPR004883 | InterPro:LOB |
| PANTHER:PTHR31304 | PANTHER:PTHR31304:SF18 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRH48482 | ProteinID:KRH48482.1 |
| SEG:seg | UniParc:UPI0002338653 | UniProt:I1KIX1 | MapMan:15.5.24 | : | : |
Description
hypothetical protein
Coordinates
chr7:-:8550657..8552335
Molecular Weight (calculated)
24867.8 Da
IEP (calculated)
8.974
GRAVY (calculated)
-0.267
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLSCNGCRV LRRGCTTECP IRISLQWINS PNSQSNATLF LAKFYGRQGL LTLLTNAPSQ LQQAVLKSLL YEACGRIVNP VLGSTGLLST GNWHLCEAAV
101: KAVLNGAPIE QAPLDGATSL QLKACNIRHV AKSDKSCGSD TLRKVKSRTT TFKRRAAKSR VESVVAELAE SELDGHGSMS HDSGSGVTRM SENKIVGGEA
201: DSDSVQSVGP ARADGEEMEL QLTLGWGPLK RQ
101: KAVLNGAPIE QAPLDGATSL QLKACNIRHV AKSDKSCGSD TLRKVKSRTT TFKRRAAKSR VESVVAELAE SELDGHGSMS HDSGSGVTRM SENKIVGGEA
201: DSDSVQSVGP ARADGEEMEL QLTLGWGPLK RQ
001: MRMSCNGCRV LRKGCSENCS IRPCLQWIKS AESQANATVF LAKFYGRAGL MNLLNTGPDH LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GNWHLCQAAV
101: EAVMRGSPVT PIACDAAVTG QAPPFNNKLC DIRHVSSRDE NVKRRSRGAC KEERNVRSLS HESSLSHESP VSSEETTTEE PKTWIGLELT LGLEPLARGN
201: HVVVPMKKRK LERCGTSEDE DTCKIELGLV CSE
101: EAVMRGSPVT PIACDAAVTG QAPPFNNKLC DIRHVSSRDE NVKRRSRGAC KEERNVRSLS HESSLSHESP VSSEETTTEE PKTWIGLELT LGLEPLARGN
201: HVVVPMKKRK LERCGTSEDE DTCKIELGLV CSE
Arabidopsis Description
LBD40LOB domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW96]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.