CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, extracellular, mitochondrion
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15442	Soybean	mitochondrion, nucleus	49.06	30.41
KRH61393	Soybean	nucleus	42.45	24.32
GSMUA_Achr3P18860_001	Banana	cytosol	41.51	23.16
KRH58049	Soybean	mitochondrion, nucleus	47.17	22.03
KRH04451	Soybean	nucleus	47.17	21.74
GSMUA_Achr6P07770_001	Banana	mitochondrion	36.79	21.2
VIT_18s0001g09250.t01	Wine grape	nucleus	44.34	21.17
Solyc04g077990.2.1	Tomato	nucleus, plasma membrane, plastid	40.57	21.08
GSMUA_Achr3P30130_001	Banana	nucleus	40.57	20.67
PGSC0003DMT400055393	Potato	nucleus	39.62	20.59
KRG91097	Soybean	mitochondrion, nucleus, plasma membrane	33.02	20.47
KRH28374	Soybean	nucleus	46.23	20.42
GSMUA_Achr4P14150_001	Banana	mitochondrion	41.51	20.37
KRH77108	Soybean	nucleus	46.23	20.16
KRH35680	Soybean	cytosol, mitochondrion, nucleus	32.08	19.88
GSMUA_Achr7P26260_001	Banana	mitochondrion	38.68	19.34
GSMUA_Achr2P13440_001	Banana	mitochondrion, nucleus, plastid	36.79	18.66
GSMUA_Achr4P32550_001	Banana	mitochondrion	36.79	18.57
Os03t0609500-01	Rice	cytosol, nucleus, plastid	34.91	15.95
TraesCS4A01G236200.1	Wheat	mitochondrion, nucleus, plastid	34.91	15.88
HORVU4Hr1G013380.2	Barley	nucleus	33.96	15.79
TraesCS4D01G077600.1	Wheat	mitochondrion, nucleus, plastid	33.96	15.65
TraesCS4B01G078800.1	Wheat	nucleus	33.02	15.22
KXG38039	Sorghum	mitochondrion, nucleus, plastid	34.91	14.98
Zm00001d033347_P001	Maize	mitochondrion, nucleus, plastid	32.08	13.55
KRG90816	Soybean	nucleus	28.3	13.39
KRH48482	Soybean	mitochondrion	28.3	12.93
KRH18248	Soybean	nucleus	34.91	12.85
KRH45269	Soybean	nucleus	26.42	12.79
KRG93864	Soybean	nucleus	33.96	12.29
KRH46923	Soybean	mitochondrion	33.96	12.16
KRH01759	Soybean	mitochondrion	33.02	11.63
KRH05602	Soybean	nucleus	0.0	0.0

Protein Annotations

EMBL:ACUP02010762	EnsemblPlants:KRH05603	EnsemblPlantsGene:GLYMA_17G2363001	PANTHER:PTHR31304	PANTHER:PTHR31304:SF1	ProteinID:KRH05603
ProteinID:KRH05603.1	UniParc:UPI0006ED751E	UniProt:A0A0R0FQS3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr17:+:39141888..39142414

Molecular Weight (calculated)

11858.2 Da

IEP (calculated)

6.078

GRAVY (calculated)

-0.308

Length

106 amino acids

Sequence
(BLAST)

001: LFQSLLFEGC GRMVNPVNGA VGLLSSGKWH VCQAAVETVL DGGVLRPSSE TFTGDSDDTR YHLRTLTLMH DVREMNENSS LMNRPQELEM ASYGNHKKNQ
101: ILNLFM

Best Arabidopsis Sequence Match ( AT4G37540.1 )
(BLAST)

001: MSCNGCRVLR KGCSETCILR PCLQWIESAE SQGHATVFVA KFFGRAGLMS FISSVPELQR PALFQSLLFE ACGRTVNPVN GAVGMLWTRN WHVCQAAVET
101: VLRGGTLRPI SDLLESPSLM ISCDESSEIW HQDVSRNQTH HCRFSTSRST TEMKDSLVNR KRLKSDSDLD LQVNHGLTLT APAVPVPFLP PSSFCKVVKG
201: DRPGSPSEES VTTSCWENGM RGDNKQKRNK GEKKLLNLFV

Arabidopsis Description

LBD39LOB domain-containing protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZE8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.