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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus, plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:mitochondrion
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P32550_001 Banana mitochondrion 74.64 74.29
KRH05602 Soybean nucleus 20.1 68.85
GSMUA_Achr2P22720_001 Banana cytosol, mitochondrion, nucleus 28.23 64.84
GSMUA_Achr3P18860_001 Banana cytosol 54.55 60.0
GSMUA_Achr3P30130_001 Banana nucleus 57.89 58.17
GSMUA_Achr4P14150_001 Banana mitochondrion 59.81 57.87
GSMUA_Achr7P26260_001 Banana mitochondrion 56.46 55.66
GSMUA_Achr6P07770_001 Banana mitochondrion 48.33 54.89
CDY17741 Canola nucleus 55.98 53.42
KRH35680 Soybean cytosol, mitochondrion, nucleus 43.06 52.63
CDY37852 Canola nucleus 54.55 52.53
KRH15442 Soybean mitochondrion, nucleus 42.58 52.05
KRG91097 Soybean mitochondrion, nucleus, plasma membrane 42.58 52.05
CDY58550 Canola nucleus 53.11 51.15
PGSC0003DMT400064185 Potato nucleus 51.67 50.94
CDY67844 Canola nucleus 55.02 50.66
CDY67455 Canola nucleus 55.02 50.44
VIT_07s0129g00330.t01 Wine grape nucleus 55.02 50.44
TraesCS4B01G078800.1 Wheat nucleus 55.02 50.0
CDY02101 Canola nucleus 57.42 49.79
Bra012913.1-P Field mustard nucleus 57.42 49.79
CDY43575 Canola nucleus 52.63 49.77
CDY23026 Canola nucleus 56.94 49.58
Os03t0609500-01 Rice cytosol, nucleus, plastid 55.02 49.57
TraesCS4D01G077600.1 Wheat mitochondrion, nucleus, plastid 54.55 49.57
Bra036040.1-P Field mustard nucleus 57.89 49.39
KRH61393 Soybean nucleus 43.54 49.19
KRH04451 Soybean nucleus 54.07 49.13
HORVU4Hr1G013380.2 Barley nucleus 53.59 49.12
KRH58049 Soybean mitochondrion, nucleus 53.11 48.9
Bra037847.1-P Field mustard nucleus 55.02 48.73
Solyc02g092550.2.1 Tomato extracellular 50.72 48.62
AT3G49940.1 Thale cress nucleus 57.42 48.58
TraesCS4A01G236200.1 Wheat mitochondrion, nucleus, plastid 54.07 48.5
CDX81315 Canola nucleus 54.55 48.31
CDX69315 Canola nucleus 51.2 47.98
Bra031833.1-P Field mustard nucleus 55.02 47.72
AT5G67420.2 Thale cress nucleus 56.94 47.6
AT4G37540.1 Thale cress nucleus 54.55 47.5
Bra012164.1-P Field mustard nucleus 56.94 46.48
KXG38039 Sorghum mitochondrion, nucleus, plastid 54.55 46.15
Bra011772.1-P Field mustard nucleus 52.15 45.99
CDX75662 Canola nucleus 52.15 45.99
KRH28374 Soybean nucleus 52.63 45.83
KRH77108 Soybean nucleus 53.11 45.68
VIT_03s0091g00670.t01 Wine grape cytosol 42.58 45.64
Solyc01g107190.2.1 Tomato mitochondrion, nucleus 46.89 45.16
PGSC0003DMT400066165 Potato mitochondrion, nucleus 46.41 44.7
Bra017831.1-P Field mustard nucleus 49.28 44.4
CDX72636 Canola mitochondrion, nucleus 49.28 44.4
CDY29564 Canola nucleus 49.28 44.4
CDX81265 Canola nucleus 49.76 43.7
VIT_18s0001g09250.t01 Wine grape nucleus 46.41 43.69
Zm00001d033347_P001 Maize mitochondrion, nucleus, plastid 51.2 42.63
PGSC0003DMT400055393 Potato nucleus 40.19 41.18
Solyc04g077990.2.1 Tomato nucleus, plasma membrane, plastid 40.19 41.18
KRH05603 Soybean cytosol, extracellular 18.66 36.79
GSMUA_Achr4P06820_001 Banana cytosol, mitochondrion, plastid 36.84 32.91
GSMUA_Achr2P14600_001 Banana mitochondrion 36.84 32.08
GSMUA_Achr9P00580_001 Banana mitochondrion 35.89 32.05
GSMUA_Achr4P13790_001 Banana mitochondrion 35.41 31.9
GSMUA_Achr3P29520_001 Banana mitochondrion 35.41 31.76
GSMUA_AchrUn_... Banana cytosol, nucleus, plastid 34.45 31.58
GSMUA_Achr9P21360_001 Banana mitochondrion 33.49 31.25
GSMUA_Achr1P20970_001 Banana mitochondrion 35.41 29.48
GSMUA_Achr4P03700_001 Banana cytosol, mitochondrion, nucleus 34.45 22.09
Protein Annotations
EnsemblPlants:GSMUA_Achr2P13440_001EnsemblPlants:GSMUA_Achr2T13440_001EnsemblPlantsGene:GSMUA_Achr2G13440_001InterPro:IPR004883InterPro:LOBPANTHER:PTHR31304
PANTHER:PTHR31304:SF1PFAM:PF03195PFscan:PS50891SEG:segUniParc:UPI0002949EE7UniProt:M0S7N5
MapMan:15.5.24:::::
Description
Putative LOB domain-containing protein 38 [Source:GMGC_GENE;Acc:GSMUA_Achr2G13440_001]
Coordinates
chr2:+:15571756..15572582
Molecular Weight (calculated)
22281.4 Da
IEP (calculated)
8.144
GRAVY (calculated)
-0.247
Length
209 amino acids
Sequence
(BLAST)
001: MSCSGCRVLR KGCSDTCVLR PCIQWIDGAD AQAHATVFVA KFVGRSTLLS FLSSVPLSHR PAAFRSLLYE ACGRTINPVN GATGLLWTGN WHLCQAAVDT
101: VLGGGTIRPL LELGGDADVE ELYRYQKGGA SSSSSSPPRK RTKDPESKVT PKFDLDLCLM PRSPEAQGKG NWRASTPSAT SESSVTTTNE GCAGDKTAEE
201: KPTLLNLFA
Best Arabidopsis Sequence Match ( AT5G67420.1 )
(BLAST)
001: MSCNGCRVLR KGCSENCILR PCIQWIETAD AQGHATVFVA KFFGRAGLMS FISAVPDSQR PALFQSLLYE ACGRTVNPVN GAIGMLWTGN WNICQAAVET
101: VLRGGSLRPI PELLTHGGGF AGFPSPTSEE ASEICTEMLN LQQNDSTDRN IYHHSRFSSS RSRSTMDSSS PTKRKRLSSE DQPSSELDLS LIPNFPIKQA
201: TPSSTRRRSV TPSMNSEDSG TTTTTTAFCD KGDVYGNGGG ETTKLLNLFV
Arabidopsis Description
LBD37LOB domain-containing protein 37 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN11]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.