Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P22720_001 | Banana | cytosol, mitochondrion, nucleus | 29.22 | 70.33 |
| KRH05602 | Soybean | nucleus | 15.98 | 57.38 |
| KRG90816 | Soybean | nucleus | 48.4 | 47.32 |
| Os01t0511000-01 | Rice | cytosol, nucleus, plastid | 38.36 | 45.16 |
| AT1G68510.1 | Thale cress | mitochondrion, nucleus | 45.21 | 42.49 |
| GSMUA_Achr9P00580_001 | Banana | mitochondrion | 43.38 | 40.6 |
| KRH48482 | Soybean | mitochondrion | 42.92 | 40.52 |
| Bra004315.1-P | Field mustard | mitochondrion | 43.84 | 40.51 |
| CDX96013 | Canola | mitochondrion | 43.84 | 40.51 |
| CDY38588 | Canola | cytosol, mitochondrion, nucleus | 43.84 | 40.0 |
| GSMUA_Achr1P20970_001 | Banana | mitochondrion | 45.66 | 39.84 |
| KRG91097 | Soybean | mitochondrion, nucleus, plasma membrane | 31.05 | 39.77 |
| KRH15442 | Soybean | mitochondrion, nucleus | 30.14 | 38.6 |
| VIT_01s0011g03530.t01 | Wine grape | cytosol, nucleus, plastid | 42.47 | 38.59 |
| KRH35680 | Soybean | cytosol, mitochondrion, nucleus | 29.68 | 38.01 |
| Solyc05g009320.2.1 | Tomato | mitochondrion | 43.84 | 37.8 |
| TraesCS5A01G529400.1 | Wheat | nucleus | 45.66 | 37.31 |
| HORVU3Hr1G016320.1 | Barley | cytosol, nucleus, plastid | 47.95 | 37.23 |
| PGSC0003DMT400037711 | Potato | mitochondrion | 42.92 | 37.15 |
| GSMUA_Achr2P14600_001 | Banana | mitochondrion | 40.64 | 37.08 |
| TraesCS4B01G361200.1 | Wheat | nucleus | 46.58 | 36.82 |
| KRH18248 | Soybean | nucleus | 47.95 | 36.46 |
| TraesCS4D01G354200.1 | Wheat | nucleus | 45.66 | 36.36 |
| KRH61393 | Soybean | nucleus | 30.59 | 36.22 |
| TraesCS3B01G106900.1 | Wheat | cytosol, mitochondrion, nucleus | 48.4 | 35.93 |
| KRG93864 | Soybean | nucleus | 47.95 | 35.84 |
| KRH46923 | Soybean | mitochondrion | 47.03 | 34.8 |
| Zm00001d010749_P001 | Maize | plastid | 44.75 | 34.63 |
| KRH01759 | Soybean | mitochondrion | 47.49 | 34.55 |
| TraesCS3D01G091700.1 | Wheat | cytosol, nucleus, plastid | 46.12 | 34.01 |
| TraesCS5A01G529300.1 | Wheat | cytosol, nucleus, plastid | 44.29 | 33.56 |
| KRH58049 | Soybean | mitochondrion, nucleus | 34.7 | 33.48 |
| EES02556 | Sorghum | mitochondrion | 45.21 | 33.33 |
| Zm00001d040004_P001 | Maize | mitochondrion | 45.21 | 33.22 |
| KRH04451 | Soybean | nucleus | 34.7 | 33.04 |
| TraesCS4D01G354100.1 | Wheat | cytosol, nucleus, plastid | 44.75 | 32.89 |
| TraesCS4B01G361100.1 | Wheat | cytosol, nucleus, plastid | 43.84 | 32.76 |
| Zm00001d010751_P001 | Maize | cytosol, mitochondrion, nucleus | 45.66 | 31.95 |
| HORVU4Hr1G086700.1 | Barley | cytosol, nucleus | 43.38 | 31.67 |
| KRH28374 | Soybean | nucleus | 34.25 | 31.25 |
| Zm00001d038717_P001 | Maize | cytosol, mitochondrion, nucleus | 45.66 | 31.25 |
| Zm00001d029506_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 44.29 | 30.99 |
| KRH77108 | Soybean | nucleus | 34.25 | 30.86 |
| OQU92400 | Sorghum | mitochondrion, nucleus, plastid | 45.66 | 30.49 |
| KXG22356 | Sorghum | plastid | 41.55 | 27.41 |
| KRH05603 | Soybean | cytosol, extracellular | 12.79 | 26.42 |
| KXG22716 | Sorghum | plastid | 46.58 | 24.82 |
Protein Annotations
| EMBL:ACUP02005044 | EnsemblPlants:KRH45269 | EnsemblPlantsGene:GLYMA_08G261900 | EntrezGene:100789066 | InterPro:IPR004883 | InterPro:LOB |
| PANTHER:PTHR31304 | PANTHER:PTHR31304:SF7 | PFAM:PF03195 | PFscan:PS50891 | ProteinID:KRH45269 | ProteinID:KRH45269.1 |
| UniParc:UPI0002337DBD | UniProt:K7L8Z2 | MapMan:15.5.24 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:26626833..26628343
Molecular Weight (calculated)
23547.3 Da
IEP (calculated)
8.292
GRAVY (calculated)
-0.225
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLSCNGCRI LRKGCGEDCA IRPCLEWINT PQAQANATLF LAKFYGRAGL VNLIDSAPQH NGPAVFKSLL YEACGRIANP TFGSVGLFWT GEWAQCQAAV
101: DAVLAGSQIK VVGASDSQGI ATHGDEHVAQ ILGIRHVSKD AEMDHVKGRA KKIKRSRTVI KPKPQVSSID SAAMLKLTWS REPGRSEGDS EETVEAMLVS
201: QNKPSRNGGV EMDLDLTLG
101: DAVLAGSQIK VVGASDSQGI ATHGDEHVAQ ILGIRHVSKD AEMDHVKGRA KKIKRSRTVI KPKPQVSSID SAAMLKLTWS REPGRSEGDS EETVEAMLVS
201: QNKPSRNGGV EMDLDLTLG
001: MRMSCNGCRV LRKGCSEDCS IRPCLAWIKS PEAQANATVF LAKFYGRAGL MNLINAGPNH LRPGIFRSLL HEACGRIVNP IYGSVGLLWS GNWQLCQDAV
101: EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE
201: SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT CQKESTCKTE LML
101: EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE
201: SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT CQKESTCKTE LML
Arabidopsis Description
LBD41LOB domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9M886]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.