Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049162_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 72.31 | 71.87 |
| EES08514 | Sorghum | nucleus | 72.62 | 69.82 |
| Os11t0497350-00 | Rice | mitochondrion, nucleus | 57.23 | 59.05 |
| GSMUA_Achr9P01390_001 | Banana | nucleus | 42.15 | 48.07 |
| GSMUA_Achr9P29340_001 | Banana | nucleus | 38.15 | 43.66 |
| KRH51141 | Soybean | nucleus | 33.54 | 39.78 |
| VIT_10s0116g00350.t01 | Wine grape | nucleus, plastid | 39.38 | 37.65 |
| PGSC0003DMT400043110 | Potato | nucleus | 40.62 | 37.61 |
| Bra019393.1-P | Field mustard | nucleus | 36.92 | 37.5 |
| Solyc02g081150.1.1 | Tomato | nucleus | 40.0 | 37.25 |
| CDX98735 | Canola | nucleus, plastid | 36.31 | 36.99 |
| CDX82920 | Canola | nucleus, plastid | 37.85 | 36.72 |
| CDX79134 | Canola | nucleus, plastid | 36.92 | 36.04 |
| Bra013598.1-P | Field mustard | nucleus, plastid | 36.92 | 36.04 |
| KRH11496 | Soybean | plastid | 35.69 | 32.31 |
| AT4G22190.1 | Thale cress | plastid | 38.15 | 32.04 |
| Zm00001d042325_P001 | Maize | nucleus | 32.31 | 25.74 |
Protein Annotations
| EnsemblPlants:Zm00001d007331_P001 | EnsemblPlants:Zm00001d007331_T001 | EnsemblPlantsGene:Zm00001d007331 | EntrezGene:103648005 | PANTHER:PTHR35132 | ProteinID:ONM26569.1 |
| SEG:seg | UniParc:UPI000220DE24 | UniProt:A0A1D6F5K5 | MapMan:35.2 | : | : |
Description
Expressed protein; protein
Coordinates
chr2:+:228883647..228884624
Molecular Weight (calculated)
33383.3 Da
IEP (calculated)
11.012
GRAVY (calculated)
-0.675
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAPEARSSA SSSPEFEFWP LYPNPAASPS CADELFAGGV LLPLPILPPK PESRNKGSGI SQCVPVAEPE PESQLGEASL LATAAAPTAS MTSQAPSTGS
101: GGGGSKRWTD IFSKKPAPGG EEKDREKDKE KRKDGACSRK QGSGHTGGAG SELNINIWPF SRSRSAGGGS GSSKPRPPTR KVSSAPCSRS NSRGEAGAPP
201: LRRWAASPGR SGGGVPVGRS SPVWQIRRPA GKPAPAPAPG PAPSASELFS DRRAPPRQHK DKPAGVANGR KPGLSGGVRG LNLSVNSCIG YRHQVSCRRV
301: EVGAARGPGP GGLFGIKGLF SKKVH
101: GGGGSKRWTD IFSKKPAPGG EEKDREKDKE KRKDGACSRK QGSGHTGGAG SELNINIWPF SRSRSAGGGS GSSKPRPPTR KVSSAPCSRS NSRGEAGAPP
201: LRRWAASPGR SGGGVPVGRS SPVWQIRRPA GKPAPAPAPG PAPSASELFS DRRAPPRQHK DKPAGVANGR KPGLSGGVRG LNLSVNSCIG YRHQVSCRRV
301: EVGAARGPGP GGLFGIKGLF SKKVH
001: MCYVPQTLHI WSHCTCSSSF LSLTNSLIYY LLLLLRPSKT LSLSLSSTMD SPTSIRSKPL PETLSPCGSQ RRRSSCDSNP PEFEFWRLTN SSFPQADSDL
101: LSADELFHDG VLLPLDLLSV KSELQSDPNI AECDPDPSPS TGSLITEQKS DLEPGLGSEL TRETTVSKRW RDIFRKSETK PPGKKEKVKE NKKEKKKTGS
201: GPSSGSGSGA ELNINIWPFS RSRSAGNNVT RPRMSFGAPT TRKVSSAPCS RSNSTGESKS RKWPSSPSRN GVHLGRNSPV WQVRRGGGAP VGKTIPEPMG
301: RVVGKREIPE TRKGKTVIES NKAKVLNLNV PMCIGYRSRL SCRTEESSGG GNSNIGSDNN NNNNANANNP NPNGLFGFRN LFIKKVY
101: LSADELFHDG VLLPLDLLSV KSELQSDPNI AECDPDPSPS TGSLITEQKS DLEPGLGSEL TRETTVSKRW RDIFRKSETK PPGKKEKVKE NKKEKKKTGS
201: GPSSGSGSGA ELNINIWPFS RSRSAGNNVT RPRMSFGAPT TRKVSSAPCS RSNSTGESKS RKWPSSPSRN GVHLGRNSPV WQVRRGGGAP VGKTIPEPMG
301: RVVGKREIPE TRKGKTVIES NKAKVLNLNV PMCIGYRSRL SCRTEESSGG GNSNIGSDNN NNNNANANNP NPNGLFGFRN LFIKKVY
Arabidopsis Description
Serine/arginine repetitive matrix-like protein [Source:UniProtKB/TrEMBL;Acc:Q8L4C5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.