Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES08514 | Sorghum | nucleus | 76.15 | 73.67 |
| Zm00001d007331_P001 | Maize | cytosol, nucleus, peroxisome | 71.87 | 72.31 |
| Os11t0497350-00 | Rice | mitochondrion, nucleus | 55.35 | 57.46 |
| GSMUA_Achr9P01390_001 | Banana | nucleus | 42.51 | 48.77 |
| GSMUA_Achr9P29340_001 | Banana | nucleus | 39.45 | 45.42 |
| Bra019393.1-P | Field mustard | nucleus | 37.92 | 38.75 |
| KRH51141 | Soybean | nucleus | 32.42 | 38.69 |
| VIT_10s0116g00350.t01 | Wine grape | nucleus, plastid | 39.76 | 38.24 |
| CDX98735 | Canola | nucleus, plastid | 37.0 | 37.93 |
| CDX82920 | Canola | nucleus, plastid | 38.53 | 37.61 |
| Bra013598.1-P | Field mustard | nucleus, plastid | 38.23 | 37.54 |
| CDX79134 | Canola | nucleus, plastid | 38.23 | 37.54 |
| Solyc02g081150.1.1 | Tomato | nucleus | 39.45 | 36.96 |
| PGSC0003DMT400043110 | Potato | nucleus | 38.53 | 35.9 |
| KRH11496 | Soybean | plastid | 37.31 | 33.98 |
| AT4G22190.1 | Thale cress | plastid | 38.84 | 32.82 |
| Zm00001d042325_P001 | Maize | nucleus | 32.72 | 26.23 |
Protein Annotations
| EnsemblPlants:Zm00001d049162_P001 | EnsemblPlants:Zm00001d049162_T001 | EnsemblPlantsGene:Zm00001d049162 | PANTHER:PTHR35132 | ProteinID:AQK49748.1 | SEG:seg |
| UniParc:UPI000221A97F | UniProt:K7UA84 | MapMan:35.2 | : | : | : |
Description
Expressed protein; protein
Coordinates
chr4:-:18524687..18525670
Molecular Weight (calculated)
33458.3 Da
IEP (calculated)
11.276
GRAVY (calculated)
-0.603
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAAEARRSS SASSSPEFEF WPLHPNPAAS PSCADELFAG GVLLPLPVLT PKPASSNIGS GISQCVPVAE PEPEPGEAFL LATVSPPPAS ITSTALPTAT
101: GGGGGGSKRW TDIFSKKPAP GAEEKDRDKE REKRKDGAGN RKQGGHSHSN GAGSELNINI WPFSRSRSAG GGSGSGSGTS KPRPPARKVS SAPCSRSNSR
201: GEAGAPPLRR WVASPGRSGG GGVAVGRSSP VWQIRRPAAK PAPVPTSAPS ASEPFTDRRA PPPRHKEKPA SAARKPGLGS GVRGLNLSVN SCIGYRHQVS
301: CRRADVGAAR GGGGLFGIKG LFSKKVH
101: GGGGGGSKRW TDIFSKKPAP GAEEKDRDKE REKRKDGAGN RKQGGHSHSN GAGSELNINI WPFSRSRSAG GGSGSGSGTS KPRPPARKVS SAPCSRSNSR
201: GEAGAPPLRR WVASPGRSGG GGVAVGRSSP VWQIRRPAAK PAPVPTSAPS ASEPFTDRRA PPPRHKEKPA SAARKPGLGS GVRGLNLSVN SCIGYRHQVS
301: CRRADVGAAR GGGGLFGIKG LFSKKVH
001: MCYVPQTLHI WSHCTCSSSF LSLTNSLIYY LLLLLRPSKT LSLSLSSTMD SPTSIRSKPL PETLSPCGSQ RRRSSCDSNP PEFEFWRLTN SSFPQADSDL
101: LSADELFHDG VLLPLDLLSV KSELQSDPNI AECDPDPSPS TGSLITEQKS DLEPGLGSEL TRETTVSKRW RDIFRKSETK PPGKKEKVKE NKKEKKKTGS
201: GPSSGSGSGA ELNINIWPFS RSRSAGNNVT RPRMSFGAPT TRKVSSAPCS RSNSTGESKS RKWPSSPSRN GVHLGRNSPV WQVRRGGGAP VGKTIPEPMG
301: RVVGKREIPE TRKGKTVIES NKAKVLNLNV PMCIGYRSRL SCRTEESSGG GNSNIGSDNN NNNNANANNP NPNGLFGFRN LFIKKVY
101: LSADELFHDG VLLPLDLLSV KSELQSDPNI AECDPDPSPS TGSLITEQKS DLEPGLGSEL TRETTVSKRW RDIFRKSETK PPGKKEKVKE NKKEKKKTGS
201: GPSSGSGSGA ELNINIWPFS RSRSAGNNVT RPRMSFGAPT TRKVSSAPCS RSNSTGESKS RKWPSSPSRN GVHLGRNSPV WQVRRGGGAP VGKTIPEPMG
301: RVVGKREIPE TRKGKTVIES NKAKVLNLNV PMCIGYRSRL SCRTEESSGG GNSNIGSDNN NNNNANANNP NPNGLFGFRN LFIKKVY
Arabidopsis Description
Serine/arginine repetitive matrix-like protein [Source:UniProtKB/TrEMBL;Acc:Q8L4C5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.