Factsheet for AT1G09770.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31065	Canola	nucleus	90.64	90.32
CDY20673	Canola	nucleus	90.4	90.08
Bra030798.1-P	Field mustard	nucleus	90.17	89.85
Bra019993.1-P	Field mustard	nucleus	89.81	89.81
CDX94951	Canola	nucleus	89.34	89.23
CDX93482	Canola	nucleus	88.39	88.28
CDY47227	Canola	nucleus	23.58	84.32
Bra027160.1-P	Field mustard	nucleus	23.22	83.05
CDY53058	Canola	nucleus	23.1	82.63
KRG92639	Soybean	nucleus	75.24	65.94
KRH34143	Soybean	nucleus	75.0	65.8
Zm00001d042287_P001	Maize	extracellular, nucleus, plasma membrane	70.5	64.32
Os04t0348300-01	Rice	nucleus	70.97	61.63
PGSC0003DMT400029953	Potato	nucleus	71.45	61.16
Solyc04g009950.2.1	Tomato	nucleus	71.45	61.09
KXG34025	Sorghum	nucleus	70.5	60.53
EES15997	Sorghum	nucleus	70.5	60.34
VIT_14s0036g00510.t01	Wine grape	nucleus	70.14	59.92
TraesCS5D01G460800.1	Wheat	nucleus	69.91	58.24
TraesCS5B01G459200.1	Wheat	nucleus	70.02	57.77
TraesCS5A01G450800.1	Wheat	nucleus	69.79	57.41
TraesCS5D01G314000.1	Wheat	nucleus	70.5	56.19
HORVU5Hr1G108630.3	Barley	nucleus	70.14	55.95
HORVU5Hr1G080010.3	Barley	nucleus	70.26	55.42
TraesCS5A01G307100.1	Wheat	nucleus	70.38	54.95
TraesCS5B01G307500.2	Wheat	nucleus	70.26	54.7
GSMUA_Achr9P23340_001	Banana	nucleus	71.8	53.77

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	MapMan:15.5.2.2	MapMan:16.4.5.1.2	EntrezGene:837506	ProteinID:AAB60730.1
ProteinID:AEE28490.1	EMBL:AK316890	ArrayExpress:AT1G09770	EnsemblPlantsGene:AT1G09770	RefSeq:AT1G09770	TAIR:AT1G09770
RefSeq:AT1G09770-TAIR-G	EnsemblPlants:AT1G09770.1	TAIR:AT1G09770.1	Symbol:ATCDC5	EMBL:AY093057	EMBL:AY519553
Unigene:At.278	EMBL:BT008801	InterPro:Cdc5p/Cef1	ncoils:Coil	EMBL:D58424	GO:GO:0000981
GO:GO:0001135	GO:GO:0002376	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005681	GO:GO:0005737	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006351
GO:GO:0006355	GO:GO:0006357	GO:GO:0006397	GO:GO:0006950	GO:GO:0006952	GO:GO:0006974
GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009605	GO:GO:0009607	GO:GO:0009870
GO:GO:0009987	GO:GO:0010204	GO:GO:0030154	GO:GO:0042742	GO:GO:0043565	GO:GO:0044212
GO:GO:0045087	GO:GO:0050832	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	RefSeq:NP_172448.1
UniProt:P92948	PFAM:PF11831	PFAM:PF13921	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF559	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI00000A032E	SEG:seg	:	:	:	:

Description

CDC5Cell division cycle 5-like protein [Source:UniProtKB/Swiss-Prot;Acc:P92948]

Coordinates

chr1:+:3161832..3165616

Molecular Weight (calculated)

95771.8 Da

IEP (calculated)

6.731

GRAVY (calculated)

-0.941

Length

844 amino acids

Sequence
(BLAST)

001: MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT EWTREEDEKL LHLAKLLPTQ WRTIAPIVGR TPSQCLERYE
101: KLLDAACTKD ENYDAADDPR KLRPGEIDPN PEAKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR LASLQKRREL KAAGIDGRHR
201: KRKRKGIDYN AEIPFEKRAP AGFYDTADED RPADQVKFPT TIEELEGKRR ADVEAHLRKQ DVARNKIAQR QDAPAAILQA NKLNDPEVVR KRSKLMLPPP
301: QISDHELEEI AKMGYASDLL AENEELTEGS AATRALLANY SQTPRQGMTP MRTPQRTPAG KGDAIMMEAE NLARLRDSQT PLLGGENPEL HPSDFTGVTP
401: RKKEIQTPNP MLTPSMTPGG AGLTPRIGLT PSRDGSSFSM TPKGTPFRDE LHINEDMDMH ESAKLERQRR EEARRSLRSG LTGLPQPKNE YQIVAQPPPE
501: ESEEPEEKIE EDMSDRIARE KAEEEARQQA LLKKRSKVLQ RDLPRPPAAS LAVIRNSLLS ADGDKSSVVP PTPIEVADKM VREELLQLLE HDNAKYPLDD
601: KAEKKKGAKN RTNRSASQVL AIDDFDENEL QEADKMIKEE GKFLCVSMGH ENKTLDDFVE AHNTCVNDLM YFPTRSAYEL SSVAGNADKV AAFQEEMENV
701: RKKMEEDEKK AEHMKAKYKT YTKGHERRAE TVWTQIEATL KQAEIGGTEV ECFKALKRQE EMAASFRKKN LQEEVIKQKE TESKLQTRYG NMLAMVEKAE
801: EIMVGFRAQA LKKQEDVEDS HKLKEAKLAT GEEEDIAIAM EASA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.