Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026851.1-P | Field mustard | nucleus, plastid | 62.36 | 68.89 |
| CDY33767 | Canola | nucleus, plastid | 62.36 | 68.89 |
| CDX81616 | Canola | nucleus, plastid | 62.07 | 64.29 |
| Solyc05g007820.2.1 | Tomato | nucleus | 26.72 | 36.61 |
| KRH74897 | Soybean | nucleus | 33.91 | 31.81 |
| PGSC0003DMT400047431 | Potato | nucleus, plastid | 36.49 | 31.36 |
| KRH70752 | Soybean | nucleus | 35.92 | 30.19 |
| Os10t0406200-01 | Rice | nucleus | 28.74 | 23.09 |
| GSMUA_Achr3P01890_001 | Banana | nucleus | 34.2 | 22.84 |
| KXG38574 | Sorghum | plastid | 27.59 | 22.54 |
| AT2G21500.2 | Thale cress | nucleus | 22.41 | 18.53 |
| AT5G18260.1 | Thale cress | nucleus, plastid | 16.95 | 18.44 |
| AT4G39140.3 | Thale cress | nucleus | 20.98 | 17.02 |
| AT1G19680.1 | Thale cress | nucleus | 19.25 | 15.09 |
| Zm00001d014199_P003 | Maize | plastid | 27.59 | 14.66 |
| AT1G75400.1 | Thale cress | plastid | 18.39 | 14.07 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | EntrezGene:837977 | ProteinID:AEE29117.1 | EMBL:AK117979 | ArrayExpress:AT1G14180 |
| EnsemblPlantsGene:AT1G14180 | RefSeq:AT1G14180 | TAIR:AT1G14180 | RefSeq:AT1G14180-TAIR-G | EnsemblPlants:AT1G14180.1 | TAIR:AT1G14180.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0016829 | InterPro:IPR001841 | InterPro:IPR013083 |
| RefSeq:NP_563938.5 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 |
| PFscan:PS50089 | PANTHER:PTHR31150 | PANTHER:PTHR31150:SF7 | UniProt:Q8GXX6 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00000ADE5F | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
Putative mandelonitrile lyase [Source:UniProtKB/TrEMBL;Acc:Q8GXX6]
Coordinates
chr1:+:4847162..4849413
Molecular Weight (calculated)
38354.8 Da
IEP (calculated)
8.947
GRAVY (calculated)
-0.654
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLCCVAAK SDRSNSTSGD FSFGLHEPYW RTNTSFSPPS SRWDVHGLMD GISCYGSSTS SNANVLRSPD LSQALHWTPN DFESATRRDQ IVKQLPGTSR
101: NVGIGDSEPG RNSSSRRFFL SKPVHPILHP SDNVRDTASD SADACSWSSG TPSSIDSVDV PEPVLDWNNN STKAQQVAAS STFKCGLCNR YLSQKSPWGS
201: RSIVRNRDMP VTGVLSCQHV FHVECLDQST PKIQRNDPLC PICTKQEGEH FKSNNIVPRL KPLYEDGPSS RPWGCAQAGD CVESAVNVPP KNTMMMINRN
301: RIRKSLSLRG NSSKDFSRKM KRSNSVAMEN LANQVSLVHS RGKEKVSW
101: NVGIGDSEPG RNSSSRRFFL SKPVHPILHP SDNVRDTASD SADACSWSSG TPSSIDSVDV PEPVLDWNNN STKAQQVAAS STFKCGLCNR YLSQKSPWGS
201: RSIVRNRDMP VTGVLSCQHV FHVECLDQST PKIQRNDPLC PICTKQEGEH FKSNNIVPRL KPLYEDGPSS RPWGCAQAGD CVESAVNVPP KNTMMMINRN
301: RIRKSLSLRG NSSKDFSRKM KRSNSVAMEN LANQVSLVHS RGKEKVSW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.