CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70752	Soybean	nucleus	89.22	79.95
PGSC0003DMT400047431	Potato	nucleus, plastid	53.91	49.38
Solyc05g007820.2.1	Tomato	nucleus	31.54	46.06
Bra026851.1-P	Field mustard	nucleus, plastid	32.61	38.41
CDY33767	Canola	nucleus, plastid	32.61	38.41
CDX81616	Canola	nucleus, plastid	32.34	35.71
AT1G14180.1	Thale cress	nucleus	31.81	33.91
Bra019673.1-P	Field mustard	nucleus, plastid	29.65	32.45
CDY49106	Canola	plastid	29.65	32.45
GSMUA_Achr3P01890_001	Banana	nucleus	43.94	31.29
KXG38574	Sorghum	plastid	34.77	30.28
Os10t0406200-01	Rice	nucleus	35.04	30.02
KRH20198	Soybean	nucleus	9.16	22.67
Zm00001d014199_P003	Maize	plastid	35.85	20.31
KRH20799	Soybean	nucleus	21.02	17.73
KRH60799	Soybean	nucleus, plastid	20.75	17.7
KRH51493	Soybean	nucleus	20.49	17.47
KRH03610	Soybean	plastid	5.66	17.21
KRH27444	Soybean	nucleus, plastid	19.95	17.13
KRH15146	Soybean	nucleus	18.33	15.67
KRH05863	Soybean	nucleus	18.33	15.67
KRH61121	Soybean	plastid	18.06	15.12
KRH51797	Soybean	nucleus	17.25	14.81

Protein Annotations

EMBL:ACUP02000086	EnsemblPlants:KRH74897	EnsemblPlantsGene:GLYMA_01G050400	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR31150	PANTHER:PTHR31150:SF7	PFscan:PS50089	ProteinID:KRH74897
ProteinID:KRH74897.1	SEG:seg	SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI0002962ECC	UniProt:K7K1W1
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:5964467..5969611

Molecular Weight (calculated)

41191.4 Da

IEP (calculated)

6.726

GRAVY (calculated)

-0.790

Length

371 amino acids

Sequence
(BLAST)

001: MGPNEPYWRT NSSFSPPPTR WDFRFQSEGL SYGVNDGVQL YGSSTSENDK ESRGWVRGNH LYDLHYSASD GTGIFLSSPS DLSQGPQWTP PAIQEISIDN
101: YETSTRKDSH PSVGRVSFTP NKEGTSVNHY CGGSTSSQSE SSESESTTKS HLSSERNFAN LRSFMSKPIH PMSFNDLTTT RDAFDPAVTD FTEFDTSTPL
201: RDGQRWSSAS SSQEFADVTE SFELETPGRS HFLSDGFKCG LCERFLSQRS PWSSRRIVRS GDMPTIGVLP CCHAFHAECL EQATPKTRKS DPPCPVCVKL
301: EENSPDQRSH LRLRTGFPRL KSSRDDGPSR PWGCVQVGDC VEGALHAPPG NTMLLLNRNR IKNPSLKGIS R

Best Arabidopsis Sequence Match ( AT1G14180.1 )
(BLAST)

001: MGSLCCVAAK SDRSNSTSGD FSFGLHEPYW RTNTSFSPPS SRWDVHGLMD GISCYGSSTS SNANVLRSPD LSQALHWTPN DFESATRRDQ IVKQLPGTSR
101: NVGIGDSEPG RNSSSRRFFL SKPVHPILHP SDNVRDTASD SADACSWSSG TPSSIDSVDV PEPVLDWNNN STKAQQVAAS STFKCGLCNR YLSQKSPWGS
201: RSIVRNRDMP VTGVLSCQHV FHVECLDQST PKIQRNDPLC PICTKQEGEH FKSNNIVPRL KPLYEDGPSS RPWGCAQAGD CVESAVNVPP KNTMMMINRN
301: RIRKSLSLRG NSSKDFSRKM KRSNSVAMEN LANQVSLVHS RGKEKVSW

Arabidopsis Description

Putative mandelonitrile lyase [Source:UniProtKB/TrEMBL;Acc:Q8GXX6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.